Gene Smed_4341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4341 
Symbol 
ID5319211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp839204 
End bp840019 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content62% 
IMG OID640776146 
Productseptum site-determining protein MinD 
Protein accessionYP_001313079 
Protein GI150376483 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.243396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAG TAGTTGTGGT TACATCTGGC AAGGGCGGCG TCGGCAAGAC AACGTCGACT 
GCCGCACTCG GCGCGGCGCT GGCGCAGCGC AACGAAAAGA CCGTCGTCGT CGATTTTGAC
GTCGGACTGC GCAATCTCGA CCTGGTGATG GGCGCTGAGC GCAGGGTCGT CTATGACCTG
GTCAACGTGA TCCAGGGTGA TGCAAAGCTG CCGCAGGCGT TGATCCGCGA CAAGCGGCTC
GACACCCTCT TCCTCCTGCC TGCATCGCAG ACCCGCGACA AGGACAGCCT GACTCCGGAA
GGCGTCGAGC GGGTCATGGC CGAGCTCAGG AAGCATTTCG ACTGGATCAT CTGCGACAGC
CCGGCAGGCA TTGAACGCGG CGCGACGCTC GCGATGCGTC ATGCCGACCT CGCCGTCATC
GTGACCAATC CAGAAGTTTC CTCCGTCCGC GACTCCGATC GTATTATCGG CCTGCTCGAC
GCAAAGACCG AAAGGGCTGA GCGCGGAGAG CGGGTTGAGA AGCACCTGCT GCTGACGCGC
TACGATGCCG TCCGCGCCGA GCGCGGCGAC ATGCTCAAGG TCGATGATGT CCTCGAAATC
CTGTCGATCC CGCTCATCGG CATCGTTCCC GAGAGCATGG ACGTTCTCAA GGCTTCCAAC
CTCGGTGCCC CGGTGACGCT TGCCGACAGC CGCAGCGCTC CGGCGCTCGC CTACCTCGAC
GCGGCGCGCC GTCTTGCAGG GGAAACAGTG CCTATGACTA TTCCTGGCGA AAAGCGTGGC
TTTCTGGGTA AGATATTCGG ACGGAGGGCA GCATGA
 
Protein sequence
MAKVVVVTSG KGGVGKTTST AALGAALAQR NEKTVVVDFD VGLRNLDLVM GAERRVVYDL 
VNVIQGDAKL PQALIRDKRL DTLFLLPASQ TRDKDSLTPE GVERVMAELR KHFDWIICDS
PAGIERGATL AMRHADLAVI VTNPEVSSVR DSDRIIGLLD AKTERAERGE RVEKHLLLTR
YDAVRAERGD MLKVDDVLEI LSIPLIGIVP ESMDVLKASN LGAPVTLADS RSAPALAYLD
AARRLAGETV PMTIPGEKRG FLGKIFGRRA A