| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4334 |
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| Symbol | |
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| ID | 5318092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 832116 |
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| End bp | 834053 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776139 |
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| Product | asparagine synthase (glutamine-hydrolyzing) |
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| Protein accession | YP_001313072 |
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| Protein GI | 150376476 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.969348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00494377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTGCGGCT TCGGCGGTTA TCTTGGTTCA ATACGGGACG GTAAGCCCCT TCTCGAAAGG
ATGACCGCCG CGATTGGCCA TCGCGGGCCG GACGAGCATG GAATCTTTAC GACCCCGGGC
GCGGGCCTCG GCCATGTCAG GCTGTCCATC GTTGGCCTTG GCGACGGCCA GCAGCCGATG
TCCGATTCGA GTGGCGAGCT GACGATCGCC TTCAATGGTG AGATCTTCAA TTATGTTGAA
CTGCGTGACG AGCTGCGCGC AAAGGGCCGC CGTCTTCGCA CGTCGAGCGA CACGGAGGTC
ATCCTCCATC TTTATAAAGA GATGGGCGAA GAATGTCTCT CCCTCCTGAA CGGCGACTTC
GCCTTTGCGA TCTGGGATGC ACGCCGGCAC AGGATGGTGC TCGCGCGCGA CCGCATGGGG
GTGCGCCCTC TCTTCCACAC GATGAAGGGC GGCACTTTCT ATTTCGCATC CGAGGTCAAG
GCGCTTCTCG AGATTCCGGG CCTCTCGGCA GAGATCGACC CGATCGCGCT TGATCAGATA
TTCACACTCT GGGCGCCGAT TGCGCCGCGT ACGCCCTTTC GTGGCATCCA CGAGCTTGAG
CCCGGCCATC TGATGGTCGC CCATCAGAGC GGCATCACCA CAAGGCCCTA TTGGCAGCTC
GATTATCCGG ACCGGGACCA GCGCTCCGCC TATACGAACG AAAACCAAGC GGCGGAGGAA
TTGCGCGCAC TCCTGACGGA GGCGACTCGG ATCCGCATGC GGGCCGACGT GCCGGTCGGC
GCCTATCTTT CCGGAGGGCT CGATTCGTCC ATCATCTCGG CGCTGGCGGC CGGGATGACG
TCCCAGGGCC TGCGCACCTT CTCCGTCACT TTCGACACTG CGGAACATGA CGAAAGCGCG
TTTCAGGAGG CGATGGCAGC GGCACTCGGA ACCGAACACC GCGCTGTGGC ATGCCGCGCC
GGGGACATCG CCAGGGACTT TCCCGATGTC GTCCGTTTCA CGGAGAAGCC GATCATCCGC
ACCGCCCCCG CGCCGCTCTA CAAATTGTCG GACCTGGTCC GCGAGACGGG TCTGAAAGTG
GTGCTGACGG GAGAGGGCGC CGACGAGGTA TTCGCCGGCT ACGACATTTT CAAGGAAGCG
CGCGTGCGCC GTTTCTGCGG CCGGCAGCCC GGTTCGCGCG TCAGGCCGCA TCTCTTCCGC
AAGCTCTATC CCTATTTGCC CGGCCTCCAG CAGCAATCGG CAGAGTACGT TGCTGCGTTT
TTCGGTGCGG GGGACGTTGC TCTCGACGAC CCGCTCTTTT CGCATCGGCC GCGCTTCAAG
GGCACGGCGG CAACCAAGAT GTTCTTCTCC GCAGATCTGC GCGCCGAGCT CAAGGGCTAC
GATGCGGCCG AAGAACTCGT CGGCCGGCTT CCCACGGCTT TCGGCCGCTG GCATCCGTTG
CACCAGGCCC AATATCTCGA AAGCCGTTTC CTGCTGCCCG GATACATTCT CTCGAGTCAG
GGCGATCGCA TGGCGATGGC GCATGGCATC GAGGGCCGTT TCCCGTTCCT CGACCATCGA
CTTGTCGAGT TCGCCGCGAA ACTGCCGCCC GAGATGAAGC TCAAGGGGCT GGTCGAGAAG
CATATTCTGC GCGAGGCGAC CAAAGACCTG CTGCCGCCGG CGATCGGCAA ACGGACGAAG
CAGCCCTATC GCGCCCCGGA CAGTCACTCC TTCAGCGGAG CGGGCGAACT CGACTATGTG
CGTTCGGCTA TGGGTGAGGA AGCGATCGCC GCCGGCGGGC TCTTCAACGC CAAGGCGGTC
ACGAAGCTCT ACGAGAAATG CCAGTCGCGG CCGGCCTCGG GGTTCCGCGA CAATGCGGCC
TTCGTCGGCG TCCTCTCGAC GCAACTCTGG CTGCAGACAT TCACCGGCAA CAGCCTCCGC
AAGGCTGAAG CTGCGTAA
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| Protein sequence | MCGFGGYLGS IRDGKPLLER MTAAIGHRGP DEHGIFTTPG AGLGHVRLSI VGLGDGQQPM
SDSSGELTIA FNGEIFNYVE LRDELRAKGR RLRTSSDTEV ILHLYKEMGE ECLSLLNGDF
AFAIWDARRH RMVLARDRMG VRPLFHTMKG GTFYFASEVK ALLEIPGLSA EIDPIALDQI
FTLWAPIAPR TPFRGIHELE PGHLMVAHQS GITTRPYWQL DYPDRDQRSA YTNENQAAEE
LRALLTEATR IRMRADVPVG AYLSGGLDSS IISALAAGMT SQGLRTFSVT FDTAEHDESA
FQEAMAAALG TEHRAVACRA GDIARDFPDV VRFTEKPIIR TAPAPLYKLS DLVRETGLKV
VLTGEGADEV FAGYDIFKEA RVRRFCGRQP GSRVRPHLFR KLYPYLPGLQ QQSAEYVAAF
FGAGDVALDD PLFSHRPRFK GTAATKMFFS ADLRAELKGY DAAEELVGRL PTAFGRWHPL
HQAQYLESRF LLPGYILSSQ GDRMAMAHGI EGRFPFLDHR LVEFAAKLPP EMKLKGLVEK
HILREATKDL LPPAIGKRTK QPYRAPDSHS FSGAGELDYV RSAMGEEAIA AGGLFNAKAV
TKLYEKCQSR PASGFRDNAA FVGVLSTQLW LQTFTGNSLR KAEAA
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