Gene Smed_4331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4331 
Symbol 
ID5318089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp829024 
End bp829683 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID640776136 
Producthypothetical protein 
Protein accessionYP_001313069 
Protein GI150376473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0121883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCG AATGGGCAAC CTATACGCTC GCCGATTTCC TGATGTTTTC TCCGCGTGTC 
TATTTCCGTC TCGTCGAACG CTATAATCAG GGACTCTGGC CGTTTCAGCT TGTTTTCATC
GCAGGCGCAC TCGCCGTCCT GTTCGCCACC GCCACCGACG GCCGGCGCGC TCGCGCCGCG
GCCATGGCCA CGCTCTCTGT GGCTTGGTTC TTCTGCGCAT GGCAGTTTCT GTGGCTGCGC
TACTCCACGA TAAATTGGGC AATGTCTTAT GGGACGGCAG CCTTCATGCT GCAGTCCGGT
TTGCTTCTTC TCGCGATCCT ATGGACGGAT CGCGCAGCAT TGCCCGCAAA CAGCCTGCGA
CGTCGCGGCG GCATCGGCCT GATGGTCTTC GGTTTGCTCG CTTATCCTTT CCTGCCGCTG
ATTGCGGGCC GCGCACCCGC CTCGGCCGAA AGCTTCGGGA CGATGCCGGA TCCGACCGCT
GCGGTGACGC TCGGCGCCCT TGTGGCGTTC CTCTCCCAGA AGCTCTGGCT GCTTCTACCG
ATTCCGCTCC TCTGGTGTGC CTTCAGCGCA CTCACTCTTC TGGCCATGGA GGATTTCGGC
GCCTGGGCGC CTTTCGTGGT GATCCTGACG ACTTTTGCCC TGCTCCTCGT CCGGCGCTGA
 
Protein sequence
MMAEWATYTL ADFLMFSPRV YFRLVERYNQ GLWPFQLVFI AGALAVLFAT ATDGRRARAA 
AMATLSVAWF FCAWQFLWLR YSTINWAMSY GTAAFMLQSG LLLLAILWTD RAALPANSLR
RRGGIGLMVF GLLAYPFLPL IAGRAPASAE SFGTMPDPTA AVTLGALVAF LSQKLWLLLP
IPLLWCAFSA LTLLAMEDFG AWAPFVVILT TFALLLVRR