| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4317 |
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| Symbol | |
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| ID | 5318892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 814420 |
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| End bp | 815742 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776122 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001313055 |
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| Protein GI | 150376459 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.769006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0636141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTTC TGAAGGCTCT CTCCCGCACG AAACTCTATT GGGGGCTGAT CGCCATTTTC
CTGATCGGGG TCCTGTTCTC GCCGGTGACT TCGTCAGGCA GGAACATCTT TCTCTCCTCC
GGCAATCTCC TCGACGTCCT TCGGCAGGTA TCGACCACCG GGCTGATCGC CACCGGCATG
ACCGCGGTCA TTCTGACCGG CGGCATCGAC CTTTCGGTCG GCTCGCTGAT GGCGATCTGC
ACGGTGGTCT GTGCGATGCT GCTGACCGTC CCCGGCGACA CGGCAGCCAT CTATCTGGGG
CTGCCGGCCG TCGGGCTTGC CGTCCTAATC CTCGGTGCGG CGGTCGCCCG CTTCATCTTC
CTCAATATCG AGAAGTCGCG ATCCGGCGAG GCGCATATCC GGGATATCAA GCTTGGCGGG
GCGCGCGGTA CCGTCCTTCC CGCCATAGCA GGCGTCGTCC TCTGTGCACT CGTCTTGAGC
TTCCTCTTGC CTCAGATGCA GACGAAATTC GGCGTGTTCG GCGTTCTGCT CGTGGCGCCG
GCGGTGGGGC TGCTGTTCGG CGCCGTCAAC GGCGTTATCA TCGTGGCCGG ACGATTGCAG
CCCTTCATCG TCACACTTGC CATGATGGTA ACGGCGCTCG GCATTGCCCG GCTCACTGCC
GGACAGAACA ACGCCGTCCT GCCGGTCTAT ACCGGCAGCA ATGCCACGGC CGACTTCGAC
GTGCTGCGGC AGCTCTTATT CGGCATCGTG CCGATGCCCG GCATATTCTT CATCGTCGCG
ATTCTTCTCT ACGGCGCGGT GCTGCGCTTC ACGCCCTTCG GCCGCTACGT CTATGCGATC
GGCGGAAACG AGGAGGCGGC GCGCCTCTCC GGCATCAATG CCGGCCGGGT GAAGATCGTC
ACCTATGCGG TCTCGGGCCT TCTCGCGGGC ATCGCCGCGG TGCTCTATGT GGCGCAGTAC
CGCCAGGGCA AGCCGGATGC GGGCGCGGGG CTCGAACTGG ATGCGATCGC TGCAGTGGTC
ATTGGCGGAA CAAGTCTGAT GGGAGGGCGC GGGAGCCTTG CCGGAACGTT CTGCGGGGTC
CTGATCTTCG GTCTGCTCTC CAACATCCTG CAGCTTCACA ACATCAATTC CAATCTTCAG
CTGGTACTGA AAGGCGTCAT CATCATCGGC ACCGTGCTCG TTCAGGAGCG CAATGCCTAC
GATCTTTTCG CGCAGTTGCG GCTGCCGGGC GCAAGCCGGC GGCCGGTTCA GGGAGACACG
TCCGTGGAGG AGCGGACGTC GAGAGAGACC TTGTCTCTAA CAATGGGAGG AAAGAAAGAA
TGA
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| Protein sequence | MTFLKALSRT KLYWGLIAIF LIGVLFSPVT SSGRNIFLSS GNLLDVLRQV STTGLIATGM
TAVILTGGID LSVGSLMAIC TVVCAMLLTV PGDTAAIYLG LPAVGLAVLI LGAAVARFIF
LNIEKSRSGE AHIRDIKLGG ARGTVLPAIA GVVLCALVLS FLLPQMQTKF GVFGVLLVAP
AVGLLFGAVN GVIIVAGRLQ PFIVTLAMMV TALGIARLTA GQNNAVLPVY TGSNATADFD
VLRQLLFGIV PMPGIFFIVA ILLYGAVLRF TPFGRYVYAI GGNEEAARLS GINAGRVKIV
TYAVSGLLAG IAAVLYVAQY RQGKPDAGAG LELDAIAAVV IGGTSLMGGR GSLAGTFCGV
LIFGLLSNIL QLHNINSNLQ LVLKGVIIIG TVLVQERNAY DLFAQLRLPG ASRRPVQGDT
SVEERTSRET LSLTMGGKKE
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