| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4316 |
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| Symbol | |
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| ID | 5318891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 812837 |
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| End bp | 814423 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776121 |
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| Product | ABC transporter related |
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| Protein accession | YP_001313054 |
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| Protein GI | 150376458 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.293814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.113849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGATG CTGTTCCGAC CTTGCTGGGA GATTCGGTCA CTACAGAACC CGCGCGGCCG
ATTTTAGCGG CTGAGGCGGT CTCTAAGTCG TTCGGAGGCG TAGCGGCGCT CAAGGATGTC
CGCTTCGACC TTCGCTCCGG CGAAATTCAT GCGCTCATGG GCGAAAACGG CGCCGGCAAG
TCGACGCTGA TGAAGGTCCT CTCCGGCGTC TACGCCGATT ACGAGGGCAC TGTCCGCGTC
GACGGAGAAA TCGCCCGCTT TTCCAGCGTT CGCGACGCCG AAGCTGCCGG GATCGCCATC
ATCCATCAGG AACTCAACCT CGTCCCGGAA CTTGGGGTCG CCGACAACAT CTTTCTTGGT
CGCGAGCGCG TGGTTGCCGG CCTCTTCGTG GACCGCAAGG CAAGCCTCGA GGCCGCGCGC
GGGCTGTTAA ATCGCCTCGG CATCGAACTC GATCCGGAGG CGCGGGTCGG GCAATTGCGG
GTCGGCGAAC AACAGCTGGT CGAAATCGCC AAGGCCCTGT CCGTGGAAGC GCGCATTCTG
ATCATGGATG AGCCGACATC GGCGCTTTCG TCCGGCGAGT GTCGGCGCCT CTTCAAGATC
GTGCGGCAGC TCGCGGCCGA TGGCGTCGGC ATCGTCTACA TTTCTCACCG GATCGACGAG
GTGATGCAGC TCAGCGATCG GGTGACGGTC TTTCGCGATG GCCGGCACGT CTGGACCCGC
CCCATGGCCG GACTGGACGA GGATACGATC ATCGCCGCAA TGGTGGGCCG CAACCTCCTG
GATGCGCATC CGGTGAACCG GCCCAAGGGT GCAGAGCCGG TCTTGTCGGT CAGTGGCCTG
TCGCTTGCCG TAGCTGGACG TCATGGCTGG CGCGACGTGC TGAAGGGTGT GAGTTTCGAC
GTTCATGCCG GCGAAATCCT CGGTATCGGC GGCTTGCTCG GAGCGGGTCG CACGGAAATA
TTGGAGACGG TCTTTGCTTC GAATGACGGT GTGCGCGGTG GCGAAATCCG GTTGGACGGC
ATAGCCGTCG ATATACGTTC ACCACGCGAT GCGCGCCGTC TGGGCTTTGC TCTGGTGACG
GAGGACCGCA AGGCAAAGGG ACTGCATCTC CAGGAATCGA TCAGAGACAA CGTGGCCCTG
CCGCTTGTCG GTAGGCTTGC ACGATTTGGT CTGCGGTCCT TCGAGCGCGA GCGGGCGCTC
GCGAGCAGGG CGGTCGAAGC GCTCGGCGTG CGTTGCGCGG GCACCGATCA GACGGCCGGA
ACATTGTCCG GCGGCAACCA GCAGAAGGTT GTCATCGGCA AATGGCTGGC GACCGGTCCG
CGCGTTCTGC TTCTCGACGA ACCGACGCGA GGCATCGACG TCGGTGCAAA ACGCGAGATC
TACGATCTCG TCTTCAAGCT CGCCGCCGAC GGCCTTGCGA TCGTCGTGGT CAGCTCCGAA
TTGCCGGAGC TCCTGCTCCT CGCCGACCGC ATTCTGGTGA TGGCCGAGGG CCGCCAGACC
GGACTCATCT CACGGGAGGA GGCGAGCGAG GAGCGAATCA TGCAGCTCGC TGCTCCGCGG
AGCACGTTTG GAAGGTCGGT TGCATGA
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| Protein sequence | MRDAVPTLLG DSVTTEPARP ILAAEAVSKS FGGVAALKDV RFDLRSGEIH ALMGENGAGK
STLMKVLSGV YADYEGTVRV DGEIARFSSV RDAEAAGIAI IHQELNLVPE LGVADNIFLG
RERVVAGLFV DRKASLEAAR GLLNRLGIEL DPEARVGQLR VGEQQLVEIA KALSVEARIL
IMDEPTSALS SGECRRLFKI VRQLAADGVG IVYISHRIDE VMQLSDRVTV FRDGRHVWTR
PMAGLDEDTI IAAMVGRNLL DAHPVNRPKG AEPVLSVSGL SLAVAGRHGW RDVLKGVSFD
VHAGEILGIG GLLGAGRTEI LETVFASNDG VRGGEIRLDG IAVDIRSPRD ARRLGFALVT
EDRKAKGLHL QESIRDNVAL PLVGRLARFG LRSFERERAL ASRAVEALGV RCAGTDQTAG
TLSGGNQQKV VIGKWLATGP RVLLLDEPTR GIDVGAKREI YDLVFKLAAD GLAIVVVSSE
LPELLLLADR ILVMAEGRQT GLISREEASE ERIMQLAAPR STFGRSVA
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