Gene Smed_4313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4313 
Symbol 
ID5318888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp809826 
End bp810779 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content62% 
IMG OID640776118 
Producthypothetical protein 
Protein accessionYP_001313051 
Protein GI150376455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.141383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAT TCGCCAGAAA AATGTGGGGA GAAACCGGTT GGGGCATGCC GACTTCGCTC 
GCCCTGCACC TGGCGCTCGC CTTGCTGTTG CTTGTGCGAC TACCTGAATT GTCTGCTCCG
GCAAAGGAGC AAAGCGTCAG CGTCGAGCTC GTCCCAACGC CGAAGAACGA GAAAAAGCCC
GAGCAAAAGC CAACCAAGCA AAAGTCGGAC GAGGCGAGAA ACCAGCGGGC GCGCGCCCAA
CCGCAGTCCT TCGAGTCCGC GGCAGCGCCG ACAGAGAAGG AAAAGCCGCC TGAGCCCGAC
TTGCCTCCGG CCGCTCCGAA GAAGACAGAA ACGCCAAGCG TGAGGCCGGA GGCTTCGCGG
CCCGCCCCGG CAAAACCGGA GAATGCCGCC AATGAAAGAC CGGCCGAAAA AAGGACGGCG
CTTGCGGAAC TCCGGGTCGA CTCCACTGGC GCGGCGAACA AGGCAGCCGA TGCTGCGGCC
GCGCCGCCCG CCGCGCCCAT TCCGCAGGAA AAGCCCGTTT TCGAGGAAGC AAGGGCGGAG
CCGACGCAGA ACCCCGCCGA GGCGAGCGCC GAGCGCGAGT CGAGCCAGCT CGTGCAGGCC
AAGGAGCTTT ATTCCAAAAA CGCCTTGTCG GATCCACACG TAAAACAGGC GATCGGCAGG
TTGCCGCCGA AGAAGCGGAT CGTGCAGCTC TGCACGATCG AGGCATTGGA GCAGATACGT
CACCAAAGAC CCGGAGCGAT CCCCGATATG TTCGGGCGGC CTGACGGCGG CTTTGCTTCG
GAAACCGCCC TTAAAGCCGA TGGCGCAGTC TTCCGCAGCC AAGGGAAGTG GTACTCCTTC
GACTTCACAT GCGAGGTCAA CCCGGAAGCG ACATCGGTCA CTTCCTTCAG CTTCGCAATC
GGCAAGGCGA TTCCGAAGAG CGAGTGGGGT GCAAGACAGT TGCCGAGCAA TTAG
 
Protein sequence
MQQFARKMWG ETGWGMPTSL ALHLALALLL LVRLPELSAP AKEQSVSVEL VPTPKNEKKP 
EQKPTKQKSD EARNQRARAQ PQSFESAAAP TEKEKPPEPD LPPAAPKKTE TPSVRPEASR
PAPAKPENAA NERPAEKRTA LAELRVDSTG AANKAADAAA APPAAPIPQE KPVFEEARAE
PTQNPAEASA ERESSQLVQA KELYSKNALS DPHVKQAIGR LPPKKRIVQL CTIEALEQIR
HQRPGAIPDM FGRPDGGFAS ETALKADGAV FRSQGKWYSF DFTCEVNPEA TSVTSFSFAI
GKAIPKSEWG ARQLPSN