Gene Smed_4312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4312 
Symbol 
ID5318887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp809257 
End bp809748 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID640776117 
Productureidoglycolate hydrolase 
Protein accessionYP_001313050 
Protein GI150376454 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG3194] Ureidoglycolate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.132466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCTC TACCGATCCG TCCGCTTGCG CATAGCGCGT TCGCGCCCTT CGGCGATATT 
ATCGAGCCAG ATGACGCCAA GAGCTTTCCG ATCAACGCCG GCAAGTGCAT TCGCTATCAC
GACCTCGCGA AGGTGGAAAC CAGCGGGCCG GAGGCTCGAA CGCTGGTCAG CCTTCTGCGT
GGCGAGCCCT ACGAGATCCC GTTGGCGTTG AAGATGGTGG AGCGGCACCC GCTCGGAAGC
CAGGCTTTCA TCCCTTTGAC GGAGAACCCC TTCCTCGTCG TCGTTGCTCC GGACGAGGGC
GGCCAGCCAG GCGAGCCGAT CGCCTTCGAG ACCGCGCCCG GTCAGGGCGT CAACATCGCG
CAGAATGTCT GGCACGGCAT CTTGACGCCG CTCCGTTCGA CTTCCGAATT TGTCGTCATC
GACCGCGGAG GCAGCGGATG CAATCTCGAG GAACACTTCT TCGACAAGCC CTATCAGGTC
GAATACGCTT GA
 
Protein sequence
MIPLPIRPLA HSAFAPFGDI IEPDDAKSFP INAGKCIRYH DLAKVETSGP EARTLVSLLR 
GEPYEIPLAL KMVERHPLGS QAFIPLTENP FLVVVAPDEG GQPGEPIAFE TAPGQGVNIA
QNVWHGILTP LRSTSEFVVI DRGGSGCNLE EHFFDKPYQV EYA