| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4308 |
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| Symbol | |
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| ID | 5319312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 804315 |
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| End bp | 806099 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776113 |
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| Product | glyoxylate carboligase |
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| Protein accession | YP_001313046 |
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| Protein GI | 150376450 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3960] Glyoxylate carboligase |
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| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0403052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA TGCGCGCCGT CGATGCAGCA GTTTTCGTAC TGGAGAAGGA AGGGATCGAT
TGCGCCTTCG GCGTGCCCGG CGCGGCGATC AACCCCTTCT ACTCGGCCCT GAGGGCACGC
GGATCGATCC GCCACATTCT CGCTCGCCAT GTCGAGGGCG CTTCGCACAT GGCGGAGGGC
TACACCCGCG CCAAGCACGG CAATATCGGC GTTTGCATCG GCACCTCGGG CCCGGCCGGC
ACGGACATGA TCACCGGCCT CTATTCGGCC TCCGCGGATT CGATCCCGAT TCTCTGCATC
ACCGGGCAAG CGCCGCGGGC GCGCCTTGAC AAAGAGGATT TTCAGGCGGT CGACATCGCC
AAGATCGCAG CACCTGTCAC GAAATGGGCG GTCACCGTCA TGGAGCCGGC GCTTGTCCCC
TTCGTCTTCC AGAAGGCGTT TCACCTGATG CGCTCCGGCC GCCCGGGGCC GGTCCTCATC
GATCTGCCCG TCGATGTCCA ACTGGCCGAG ATCGAATTCG ATCCGGAAAC CTACGAGCCG
CTTACCCCCT ACAAGCCGGC CGCCACGCGT GCACAGGCCG AAAAGGCGCT CGCCATGCTG
AATGCGGCGG AGCGGCCGCT GATCGTCGCC GGTGGTGGCA TCATCAATGC GGATGCATCC
GATCTCCTTA CCGAATTTGC CGAGATCACC GGCGTTCCGG TCGTTCCGAC GCTGATGGGC
TGGGGCGTCA TCCCTGACGA CCATCCGCTG ATGGCAGGGA TGTGCGGCCT GCAGACCTCA
CACCGTTACG GCAATGCGAC CCTGCTTGCT TCCGATTTCG TCTTTGGCAT AGGCAATCGC
TGGGCCAACC GTCACACCGG CAATGTTCCG ACCTATACCG AAGGCCGCAA GTTCATCCAT
GTCGATATCG AGCCGACGCA GATCGGCCGC GTCTTTGCTC CCGATTTCGG GATCGTCTCC
GACGCAGGTG CCGCGCTCAA GCTCTTTCTC GACGTCGCGA CAGAATGGAA GACCGCCGGC
AAGCTGCGCG ACTGGTCGGG CTGGGCCGGA GAATGCCGCG AACGCAAGCG GACCATGCTG
CGCAAAACCC ATTTTGATCA GACGCCGCTG AAACCCCAGC GCGTCTACGA GGAGATGAAC
AAGGCCTTCG GCCGCGACAC CTGCTACGTC TCCACGATAG GGCTTAGCCA GATTGCCGGT
GCGCAGTTCC TGCACGTTTA CAAGCCCCGC AACTGGATCA ATTGCGGACA GGCGGGCCCG
CTTGGCTGGA CGCTGCCGGC GGCGCTCGGC GTAAGAGCCG CTGACCCGAA CCGACCGATC
GTCGCACTTT CCGGCGATTA CGACTTCCAG TTCCTGATCG AGGAACTCGC GGTTGGTGCC
CAGCACAAGC TCCCTTACCT GCATGTCGTC GTGAACAACT CCTATCTCGG CCTGATCCGG
CAGGCGCAGC GTGGCTTCAA CATGGATTTC GAGGTCAGCC TCGCCTTTGA AAACATCAAT
GCCGAGGGTG ATGCGGAGAA GGGGTATGGG GTCGACCATG TGGCGGTTGC CGAAGGCCTC
GGCTGCAAGG CCATTCGCGT CAGGAGCCCG AATGAGTTCG CCGACGCCTT CGACAGGGCG
CAGGCTCTGA TGGAAGAGCA CCAGGTGCCC GTCGTCATCG AATTCATCCT GGAGCGCGTC
ACCAATATCG CCATGGGCAC GGATATCAAT TCGGTCGTCG AGTTCGAGGA ACTCGCCGAA
CGCGGCGAGG ACGCACCGAC CGCGGTTGCC GCCCTGCTCG ATTGA
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| Protein sequence | MAKMRAVDAA VFVLEKEGID CAFGVPGAAI NPFYSALRAR GSIRHILARH VEGASHMAEG
YTRAKHGNIG VCIGTSGPAG TDMITGLYSA SADSIPILCI TGQAPRARLD KEDFQAVDIA
KIAAPVTKWA VTVMEPALVP FVFQKAFHLM RSGRPGPVLI DLPVDVQLAE IEFDPETYEP
LTPYKPAATR AQAEKALAML NAAERPLIVA GGGIINADAS DLLTEFAEIT GVPVVPTLMG
WGVIPDDHPL MAGMCGLQTS HRYGNATLLA SDFVFGIGNR WANRHTGNVP TYTEGRKFIH
VDIEPTQIGR VFAPDFGIVS DAGAALKLFL DVATEWKTAG KLRDWSGWAG ECRERKRTML
RKTHFDQTPL KPQRVYEEMN KAFGRDTCYV STIGLSQIAG AQFLHVYKPR NWINCGQAGP
LGWTLPAALG VRAADPNRPI VALSGDYDFQ FLIEELAVGA QHKLPYLHVV VNNSYLGLIR
QAQRGFNMDF EVSLAFENIN AEGDAEKGYG VDHVAVAEGL GCKAIRVRSP NEFADAFDRA
QALMEEHQVP VVIEFILERV TNIAMGTDIN SVVEFEELAE RGEDAPTAVA ALLD
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