Gene Smed_4299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4299 
Symbol 
ID5319303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp793014 
End bp793787 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content64% 
IMG OID640776104 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001313037 
Protein GI150376441 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.231101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.275572 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CGACCTTCAA CATCAACGGT GTGAACAAGC GACTCGACCA CCTCCTGATC 
TGGCTAGCAG CGGCTGGGCC GGACGTGGTC TGTCTGCAGG AGCTCAAGGC GACGGACGGA
CAGTTCCCCG AGGCTGCGAT CGAGGCGGCC GGTTACGGTG CCGTCTGGCT GGGCCAGACA
GCCTGGAACG GCGTTGCAAT TCTTGCCCGC GGCTGCGAAC CGGTCCTCAC GCGAACAGGC
TTGCCCGGCG ATCCGTCCGA TACGCAGAGC CGCTACATCG AGGCCGCGGT GAACGGCATC
CTGATCGCCT CGCTCTATGC GCCCAACGGC AATCCGCAGC CCGGCCCGAA ATTCGACTAT
AAGCTCGCCT GGCACCAACG CCTCAATCTG CACGCTGCCG CGCTTCTCGA AGCGCGCGTT
CCGGTGTTAC TCGCGGGCGA CTACAATGTC GTCCCGGAAC CGCGCGACAT CTATCCGACC
CGCTCCTACG ACGGCAACGC TCTCGTCCAG CCGGAAAGCC GCGCAGCGTT CAAGAGCCTT
GTTGAACAGG GATGGCTCGA CGCACTTCGT AAGGTCCACC CGCAGGCGCA GCTTTTCACC
TTCTGGGATT ATCGCCGGAA CCGCTGGCAG CGCGACGCCG GCCTTCGCCT CGACCACATT
CTCCTGAGCG GAAAGCTCAA GCGCCGGCTG ACCGGCGCCG GAATCGATCG CGAAATCCGC
GGGCTTGAAG GGGCAAGCGA CCATGCGCCG GTCTGGATCA CATTGCGCGA GTAG
 
Protein sequence
MKIATFNING VNKRLDHLLI WLAAAGPDVV CLQELKATDG QFPEAAIEAA GYGAVWLGQT 
AWNGVAILAR GCEPVLTRTG LPGDPSDTQS RYIEAAVNGI LIASLYAPNG NPQPGPKFDY
KLAWHQRLNL HAAALLEARV PVLLAGDYNV VPEPRDIYPT RSYDGNALVQ PESRAAFKSL
VEQGWLDALR KVHPQAQLFT FWDYRRNRWQ RDAGLRLDHI LLSGKLKRRL TGAGIDREIR
GLEGASDHAP VWITLRE