| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4297 |
|---|
| Symbol | |
|---|
| ID | 5318460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 790851 |
|---|
| End bp | 791630 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640776102 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001313035 |
|---|
| Protein GI | 150376439 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.32686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.261339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCTGGC GTGGCTGTGC GCGAACCCCT CCGAGCGAGT TGACGATGAC CGCTTCCCCG
AACGACGAAC CGCGACCGCC GCTTCTGCTT CTGCCAGGCA CCGCGTGCGA CCAGCGAGTC
TTTGCGTCCC TGATCGACAG GCTCGGCGAT TATCCGGTCC TGATCGGGGA CATGGGCGGC
GCTCGGACAA TGGCGGCGCT CGCCGGAAAT ATCCTTGCGG CTGCACCGCC CTATTTTCTG
CTCGCCGGCT TTTCGCTTGG CGGCATTTGC GCGCTTGAAA TGGTGGCGCA GCAGCCGGAG
CGGATCGGAA AGCTCGCTCT GATCGATACG ACCGCGCGCC CCGATCCGGC AGAAAATGCC
GCGGTCCGGC GCAAGGCGGT TGCGGATGCG CGGGAGAAGG GAATGGACGG GTTTATCCTT
GATAACTGGC CGCGACTCGT CGCCCCGACC AATGTCCATG ACGGAAGCCT GCGCGACACG
ATCGTCGCCA TGGCGCGCGA TTGCGGGCCT GACCGGCTTG CCGAGCACGC GGAAGTCGCC
ATCAGCCGCG CCGACAGCCG GCGGCGTCTT GCCGAGATCA GGCAACCGAC GCTGGTCCTT
GCAGGAGCGC ATGAGGAGGT GTGCCCGCTC GATGCGCAAC AGGAACTCGC TGCCGGAATT
CCCGGCGCGG AGCTCCATCT CATCGCAGAA GCAGGCCATT TCGCACCGCT TGAGAACCCC
GATGCCGTGG CACTCGTCAT GAAGCGCTGG CTTGAGGCCG GTTCCGGCCC CTTTTCGTAA
|
|---|
| Protein sequence | MAWRGCARTP PSELTMTASP NDEPRPPLLL LPGTACDQRV FASLIDRLGD YPVLIGDMGG
ARTMAALAGN ILAAAPPYFL LAGFSLGGIC ALEMVAQQPE RIGKLALIDT TARPDPAENA
AVRRKAVADA REKGMDGFIL DNWPRLVAPT NVHDGSLRDT IVAMARDCGP DRLAEHAEVA
ISRADSRRRL AEIRQPTLVL AGAHEEVCPL DAQQELAAGI PGAELHLIAE AGHFAPLENP
DAVALVMKRW LEAGSGPFS
|
|---|
| |