| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4293 |
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| Symbol | |
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| ID | 5318456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 786198 |
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| End bp | 787226 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776098 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001313031 |
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| Protein GI | 150376435 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.719683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG ATAAGGTCAC GTCGAACGAT GTTGCACGCT TGGCGGGCGT TAGCCAATCG
GCCGTATCGC GCTATTTCAC GCCGGGAACG TCCGTTTCCA AAAAGACGGC GGAGAAGATC
AGGGCGGCCG CTGAAGAGCT TGGCTACCGT CCTAACGTGC TTGCGCGCTC GCTGATCACC
GGGCGCAGCC GCATCATCGG CCTCGTCGTG GCTTATCTGG AAAACTACTT CTATCCGGAA
GTGGTGGAGC GTCTGTCGAA AGCGCTGCAG GACCAGGGCT ACCATGTGCT GGTCTTCATC
TCCTCGATCG CATCGGAAAA CGTGGACCAG ATCACCCAGG AGATCCTGGA CTATCAGGTG
GACGGCATCG TGCTCGCTTC GGCGAACATG TCCTCCGAAC TGGCGGCGCG ATGCCACGCC
TCAGGCGTGC CGATCGTGCT GTTCAACCGC CTTCAGGACG ACGAGCGGCT CTCCGCCGTC
ACCTCGGACA ACCGTGCCGG CGGCCGCCAG TTGGCGGAGC TGTTCGTTTC GCTAGGCCAC
AGGCGCTGCG GCTACATCGC CGGTTTCGAA GGCGCCTCGA CTCAGCGCGA CCGGGAACGG
GGATTTCGCG AGGGGCTGGA GGCGGCAGGC CTCCCGCTTT CTGCGCGCGA GGTCGGCAAC
TTCCGATATG AGGACGCGCA GGCCGCGGCA CGGCGCATGT TTGCCGGCCC AGAGCACCCC
GACGCCGTCT TCGTCTGCAA CGACCACATG GCCTTCGCGG TGATGGACGT GCTGCGCTTC
GAACTGGGGC TCCGCATTCC CGACGACGTT TCGGTTGCCG GCTTCGACGA TGTGCCGCCG
GCACGCTGGC CGGCCTACAA CCTGACGACG ATCCGCCAGA ACGTTGACGA CATGGTCGCC
GAAACGGTGG CCACGCTCAT GCACAGCATC AAGGAGGGCG AAGGGGCAGC GCGCCGCATC
ACCCTCGACG GCGCTCTCGT CCTGCGCGGC TCGACCCGCG CGAAAGCTCT GACAGAAGAG
ACCCGCTAA
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| Protein sequence | MANDKVTSND VARLAGVSQS AVSRYFTPGT SVSKKTAEKI RAAAEELGYR PNVLARSLIT
GRSRIIGLVV AYLENYFYPE VVERLSKALQ DQGYHVLVFI SSIASENVDQ ITQEILDYQV
DGIVLASANM SSELAARCHA SGVPIVLFNR LQDDERLSAV TSDNRAGGRQ LAELFVSLGH
RRCGYIAGFE GASTQRDRER GFREGLEAAG LPLSAREVGN FRYEDAQAAA RRMFAGPEHP
DAVFVCNDHM AFAVMDVLRF ELGLRIPDDV SVAGFDDVPP ARWPAYNLTT IRQNVDDMVA
ETVATLMHSI KEGEGAARRI TLDGALVLRG STRAKALTEE TR
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