| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4292 |
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| Symbol | |
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| ID | 5318455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 785434 |
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| End bp | 786198 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776097 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001313030 |
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| Protein GI | 150376434 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.487626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC CGCGCACACC CTCTTTCCGT CTCGACGGCA GGCGCGCCCT GGTCGCTGGA
GCCTCGTCCG GCATCGGTCT CGGTTGCGCG GTCGCGCTGG CGGAAGCGGG CGCCCATGTG
GTTCTGGCGG CGCGCTCGCC GGAGAAGCTT GACGAAGCGG TCGAGGCGAT CCGTAGGGAA
GGTCTTTCGG CCGAAGCCCT GGTGCTCGAT GTCGCCGACC TCGAGGCGAC CGAGGCTGCC
GTCGCGGCGG AGCGGCCGTT CCAGGTTTTG GTCAACAGCG CGGGCATCGC CCGTCACGGA
CCGGCGGCGG ATACGGCTCC GGAGGACTTC GACGCTGTTT TCGGGCTCAA TGTACGCGGC
GCCTATTTCC TGACGAGGGC CGTTGCCAAA GGGCTCATTG CAGCCGGTCA ACCGGGTTCG
CTCATCAACA TCTCCTCGCA GATGGCGCAT GTCGGCGGCA TCGACCGGGC CGTCTACAGC
GCTACCAAAC ATGCCGTCGA GGGCTTTACC AAGTCGATGG CGATCGAGTG GGGACCGGCG
GCCATTCGGG TGAATACCAT CTGCCCGACA TTCATCCGCA CGCCGTTGAC CAAGCAGACA
TTCTCGAAGC CTGAACGGGT CCAATGGATA ACGGAGAAAA TCAAGCTCGG GCGTCTCGGT
CGCGTGGAAG ACATTATGGG TGCCGTCACC TATCTTGCGA GCGATGCCTC GGCGATGGTG
ACGGGAACCG CGCTGATGGT CGATGGGGGT TGGACAGCAG ACTGA
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| Protein sequence | MKLPRTPSFR LDGRRALVAG ASSGIGLGCA VALAEAGAHV VLAARSPEKL DEAVEAIRRE
GLSAEALVLD VADLEATEAA VAAERPFQVL VNSAGIARHG PAADTAPEDF DAVFGLNVRG
AYFLTRAVAK GLIAAGQPGS LINISSQMAH VGGIDRAVYS ATKHAVEGFT KSMAIEWGPA
AIRVNTICPT FIRTPLTKQT FSKPERVQWI TEKIKLGRLG RVEDIMGAVT YLASDASAMV
TGTALMVDGG WTAD
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