| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4285 |
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| Symbol | |
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| ID | 5319121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 777581 |
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| End bp | 779398 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776090 |
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| Product | peptidase M20 |
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| Protein accession | YP_001313023 |
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| Protein GI | 150376427 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4187] Arginine degradation protein (predicted deacylase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.194958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.944988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATG CACAGGAAAA GACTGCCTCT CGCGCGGAAA GCCGGATCGA CGGCGAGCAG
GTGCGGCAAA TCGCCCTGCG CATCACGTCT TGGCCGAGCG AAACCGGCAC GCCGGGCGAA
GCATCCTTCG CGGATCGCCT TCATGCTCTT CTCCGCGAGC TTCCCTATTT TCGGGAGCAT
CCGGAAGACC TGCACCTCAT TGCAAGTCAC GGTGAGCCGC TGACCCGCAA TGTCGTTGCG
CTCGTTCGCG GCACGGGTAA GCGAACGCTG GTCATGGCCG GCCACTTCGA CACGGTTTCG
ACCGACAATT ATCACGAGCT TAAGGCCCTC GCCTGCGACA GCCTGGCGCT CAAGGATGCG
CTCATCGAAA GCCTGTCGGC ACGCGACGAC CGGTCCGAGC AGGAAGAGCG GGCCCTGCAG
GATCTGGCGA GCGGCGACTT TCTCCCCGGC CGCGGTCTGC TGGACATGAA GAGCGGGCTC
GCGGTGGCCA TCGCCTGTCT TGAACAATTC GCGGCCGACA CGGGCCGGCA GGGCAATCTC
ATGCTCGTCG CCACCCCCGA CGAGGAACGC GAAAGCCGGG GTATGCGATC GTTTCGAAAT
GCATTGCCCG GTCTGGTCGG GGATTTCGAT ATCGAGATCG CCGGGGGCAT CAACCTCGAT
GTGACCTCGG ATCAGGGCGA CGGGAGCGAA GGCCGGGCCG TTTACGCCGG CACGATCGGC
AAGCTTCTGC CCTTTGCGCT GGTGATCGGC TGCAGTTCCC ATGCGAGCTA TCCCTTCGAA
GGGGTAAGCG CACAGGCCAT GGCAGCCGGC ATCCTGGAGC GTCTGGAAGG GAACGCTTCC
CTGGCGGATC GCGACGACAA CGACATTTCG CCGCCGCCGA TCTGCCTGGA GGCGAAGGAT
TTGCGCGACG GTTACGAGGT GACGACGCCG GAGCGTTTCT GGATAGCTTT CAACTGGCTC
TACCATGCGA TGACGGCGGA CGCACTCTTT GCGCGCTTCC GAGAGGAAGT GCTGACCGGC
GCGAACGAAG CCATCGAGAA GTTTGCGGCA CAATCTGCCG AATACGGCAG GCTCGTCGGC
AGACGGGCGG GCGTGATGCC GGCCACGCCG CACCTGATGT CGTTCGGGGA ATTGCGGGCG
GCGGCTGCAC GGGTTTTCGG AGACGGCTTC GACGCGTTCT ATGCCGAGAA GGAAAGCGTA
TTCTCTCAGA GCGACAACCC GCTCGTCGCC ACGCGGCAAC TGACGGAGTG GCTCGTCGGC
ATCGCGCGCC TCTCCGGTCC CGCCATCGTC ATCGGATTTG CCGGCCTGCA CTACCCGCCT
AGCCATCTGC GCCTGAGCGA AGGAAACGAC CGGTCCCTTC ATCAGGCGGT CGAGAAGGCG
CGTGCCAGTC TCGGCAACGA TCCCGCACGA AGCCTCGTCT GGAAGCCGCA TTTCTACGGA
ATCTCGGATA TGAGTTTTCT CGGGCTTGCG GCAGGCGATA GCCACATCGT TTCGGACAAT
ACCCCAATCT CGAGGCTCGT CGATCGGCCG GGCGAGAATG CGCTGCGCTT TCCCACGGTT
AACCTCGGTC CCGGGGGAGG GAGTTCCATC AGAAGTTCGA GCGCGTATAC GCGCCTTACG
CCTTCGAGGT CCTCCCGGAT ATGGTTTTCG AGATCGCGAG GCGCTTTCTC TCCGACTGCA
GTCACTGAAA CGGACGCCGC CTTGGTGCGC TTGGCAACGG ACACTTTTAA ACAAGGATTG
CGCAGGCGCC CTAACGAGGC GCCGCGGTTT TACGCGTTCC CCCTAGGAAA TCAGCGTAGC
GGTCGCCCAG CATTATGA
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| Protein sequence | MKNAQEKTAS RAESRIDGEQ VRQIALRITS WPSETGTPGE ASFADRLHAL LRELPYFREH
PEDLHLIASH GEPLTRNVVA LVRGTGKRTL VMAGHFDTVS TDNYHELKAL ACDSLALKDA
LIESLSARDD RSEQEERALQ DLASGDFLPG RGLLDMKSGL AVAIACLEQF AADTGRQGNL
MLVATPDEER ESRGMRSFRN ALPGLVGDFD IEIAGGINLD VTSDQGDGSE GRAVYAGTIG
KLLPFALVIG CSSHASYPFE GVSAQAMAAG ILERLEGNAS LADRDDNDIS PPPICLEAKD
LRDGYEVTTP ERFWIAFNWL YHAMTADALF ARFREEVLTG ANEAIEKFAA QSAEYGRLVG
RRAGVMPATP HLMSFGELRA AAARVFGDGF DAFYAEKESV FSQSDNPLVA TRQLTEWLVG
IARLSGPAIV IGFAGLHYPP SHLRLSEGND RSLHQAVEKA RASLGNDPAR SLVWKPHFYG
ISDMSFLGLA AGDSHIVSDN TPISRLVDRP GENALRFPTV NLGPGGGSSI RSSSAYTRLT
PSRSSRIWFS RSRGAFSPTA VTETDAALVR LATDTFKQGL RRRPNEAPRF YAFPLGNQRS
GRPAL
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