Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4282 |
Symbol | |
ID | 5319118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 774189 |
End bp | 774602 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776087 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001313020 |
Protein GI | 150376424 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAGTC GATTCCTCTC GGCCGTTGCT CTTGCAGCGC TCTCGTTCAC TACAGCTTCG GCCGGCGACA GGCCCGCCGG CAAGGTTACG GTCGTCTTCG ACCACGTCCT TCCGAACGTG CCCGGCAAGA GCATGAGGGG CGTTCTTGTC GAATACGAAC CGGGCGGCGG GTCACCCGCC CACACGCACC CCAAGTCCGC CTTCATCTAT GCCACTGTGC TCGAGGGCGC GATCCGCAGC AGCGTCAACG GCTCGCCGGA AAAGGTCTAT CAGGTCGGCG AAAACTTCTA CGAGGATCCA GGCTCCCGAC ATGAAGTAAG CGTGAACGCC AGCGACACGG AACCCGCGCG GCTGCTGGCC GTGTTCGTCC TCGACACCGA GGAAAAGGAA CTGACCACGC CCATCAAGGA GTGA
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Protein sequence | MYSRFLSAVA LAALSFTTAS AGDRPAGKVT VVFDHVLPNV PGKSMRGVLV EYEPGGGSPA HTHPKSAFIY ATVLEGAIRS SVNGSPEKVY QVGENFYEDP GSRHEVSVNA SDTEPARLLA VFVLDTEEKE LTTPIKE
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