Gene Smed_4282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4282 
Symbol 
ID5319118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp774189 
End bp774602 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content62% 
IMG OID640776087 
Productcupin 2 domain-containing protein 
Protein accessionYP_001313020 
Protein GI150376424 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAGTC GATTCCTCTC GGCCGTTGCT CTTGCAGCGC TCTCGTTCAC TACAGCTTCG 
GCCGGCGACA GGCCCGCCGG CAAGGTTACG GTCGTCTTCG ACCACGTCCT TCCGAACGTG
CCCGGCAAGA GCATGAGGGG CGTTCTTGTC GAATACGAAC CGGGCGGCGG GTCACCCGCC
CACACGCACC CCAAGTCCGC CTTCATCTAT GCCACTGTGC TCGAGGGCGC GATCCGCAGC
AGCGTCAACG GCTCGCCGGA AAAGGTCTAT CAGGTCGGCG AAAACTTCTA CGAGGATCCA
GGCTCCCGAC ATGAAGTAAG CGTGAACGCC AGCGACACGG AACCCGCGCG GCTGCTGGCC
GTGTTCGTCC TCGACACCGA GGAAAAGGAA CTGACCACGC CCATCAAGGA GTGA
 
Protein sequence
MYSRFLSAVA LAALSFTTAS AGDRPAGKVT VVFDHVLPNV PGKSMRGVLV EYEPGGGSPA 
HTHPKSAFIY ATVLEGAIRS SVNGSPEKVY QVGENFYEDP GSRHEVSVNA SDTEPARLLA
VFVLDTEEKE LTTPIKE