Gene Smed_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4279 
Symbol 
ID5319115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp771047 
End bp771409 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content58% 
IMG OID640776084 
Productresponse regulator receiver protein 
Protein accessionYP_001313017 
Protein GI150376421 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.718019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGC GCGCTCGCAT CCTCATTGTG GAAGATGAAT GGCTCATAGC GGAAGATCAC 
GCGGCGAGCC TCCGCGAAGC AGGTTATGTG GTGGTTGGCC CCGTCCCATC GGTGAAGCAG
GCGCTTCAGG CGATGGAAAA TCAGGAAATC GATCTTGCCC TTCTCGATAT TCAGCTTTGG
AAGGAAATGA GCCTGCCGCT GGCGGAACAT CTGAAAGCCA AAGGTGTGCC CTTCGCGTTC
CTCAGCGGCT ACTCCGACCA GAAGCTGCCG CCGGACCTGA GTGATCGGGA GGTCATTCCA
AAACCGGTCG ATGCGGCCTT TCTTGCCGAG GCCGTCGCCC GTCTCTGCAA GCATACGGGC
TGA
 
Protein sequence
MEVRARILIV EDEWLIAEDH AASLREAGYV VVGPVPSVKQ ALQAMENQEI DLALLDIQLW 
KEMSLPLAEH LKAKGVPFAF LSGYSDQKLP PDLSDREVIP KPVDAAFLAE AVARLCKHTG