| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4276 |
|---|
| Symbol | glgA |
|---|
| ID | 5319038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 765285 |
|---|
| End bp | 766745 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640776081 |
|---|
| Product | glycogen synthase |
|---|
| Protein accession | YP_001313014 |
|---|
| Protein GI | 150376418 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.377869 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATAC TGTCTGTGAC GGCCGAAATT TTTCCACTCG CAAAGACTGG CGGCCTTGCA
GATGTAGCTG GATCGCTTCC CAAGGCGCTC CAGGCTCACG GTATCCATAC GCGCAGCTTC
GTTCCCGGCT ATCCCGGCGT GGTTCGTGCG CTCAGCGAGG CGTCTGCGAT CACCGAGTTC
GACAACCTGT TCGGCGAACG CGCCACCCTC CTCGCCGGGC GAGCGCAGGG ACTCGATCTG
TTCGTGCTCG ATGCTCCTGG TTTCTACAAC AGGCAAGGAC CTCTCTACAC CGACACGCAC
GGCCGGGAAT ATGCGGACAA CTGGAAACGC TTCGCCGCCT TTTCCCTGGT CGGATCGCAA
ATTGCACGCG GCCTCGTAAC GAACTGGCGC CCCGATGTGA TCCACGCGCA TGACTGGCAT
GCCGCAATGA GCCTCCTCTA TTTGAAGTAC GCCGGCGACG ACTCCGTTCC CCGTGTCCTC
ACCGTGCACA ACCTTGCGTT CCAGGGGCAA TTCCCGGCCT ACTACTTCCC CGAGCTGGGG
CTTCCGGCCG AAGCCTATTC TATCGATGGC GTCGAATATT ACGGCGACAT CGGTTTCCTT
AAGGGCGGAC TGCAGGCCGC GGATGCGATC ACCGTGGTCA GCCCTACTTA TGCACGGGAA
GTCATGTCGC CGGCTTTCGG CATGGGCCTC GAGGGCGTGA TGAACGAGCG GCATGTCGAC
GTCGTCGGCA TCGTCAACGG GATAGACCTG GAGGTCTGGG ATCCATCCTC GGATCCCTAC
ATCGAGCATC ACTATTCGAC GCGCGTACCG CTGCGCCGCC TACCCAACCG GCAGGTGCTG
CTCCGGCAGT TCGGGCTGCC GAACACGTGC GGACCGGTCT TCGCCAGCGT CAACCGATTG
ACATGGCAGA AGGGCATGGA CCTTCTCGCG GCAACCGCGG ACGAGATCGT CAGGAATGGC
GGCACCCTGA TCGTCCATGG ACAGGGCGAC GAGGCGCTGG AGGCCGCGTT CATGGATCTC
ATGCGACGGT ATCCGCAGAA CGTTGGGGTC AGCATCGGTT ATGACGAGCG CCTCGCCCAC
AGAATTCATG CCGGTGCCGA TGCCATGCTC GTTCCGTCCC GCTTCGAGCC CTGCGGCCTC
ACGCAACTCT ATGCGCTGCG CTACGGCTGC GTGCCCATCG TCTCTCGCAC GGGCGGATTG
TCAGAAACAA TCATCGATGC GAACGATGCC GCGCTTCACG CCCATGTCGC AACCGGCATT
CAGTTTACGC CCATAGACAA GCAAGGTCTG CGCCTCGCAC TGCGCCGCGC CCTGAGGCTC
TACCGACTGC GACGCGTCTG GGAGGGGCTG CGCCGGCAAG GCATGAAAAC CGATTGCTCC
TGGCACCGCA GTGCCGCCCG CTATGCAGAG CTTTACAGCG AGCTCCTCAA CCCCGACATG
CGTCTGGTCC GCAGCGCCTG A
|
|---|
| Protein sequence | MQILSVTAEI FPLAKTGGLA DVAGSLPKAL QAHGIHTRSF VPGYPGVVRA LSEASAITEF
DNLFGERATL LAGRAQGLDL FVLDAPGFYN RQGPLYTDTH GREYADNWKR FAAFSLVGSQ
IARGLVTNWR PDVIHAHDWH AAMSLLYLKY AGDDSVPRVL TVHNLAFQGQ FPAYYFPELG
LPAEAYSIDG VEYYGDIGFL KGGLQAADAI TVVSPTYARE VMSPAFGMGL EGVMNERHVD
VVGIVNGIDL EVWDPSSDPY IEHHYSTRVP LRRLPNRQVL LRQFGLPNTC GPVFASVNRL
TWQKGMDLLA ATADEIVRNG GTLIVHGQGD EALEAAFMDL MRRYPQNVGV SIGYDERLAH
RIHAGADAML VPSRFEPCGL TQLYALRYGC VPIVSRTGGL SETIIDANDA ALHAHVATGI
QFTPIDKQGL RLALRRALRL YRLRRVWEGL RRQGMKTDCS WHRSAARYAE LYSELLNPDM
RLVRSA
|
|---|
| |