Gene Smed_4273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4273 
Symbol 
ID5319035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp761850 
End bp763115 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content60% 
IMG OID640776078 
Productputative adenylate/guanylate cyclase 
Protein accessionYP_001313011 
Protein GI150376415 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.889875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA CGAAGCCGGG CGAGGCGGAT ATCGCATTGC AGTCTCCAAC AGAGCCACCC 
TCGAACTTGC CCGACGGCAG CGAGGGGATA TGGCCGGCGC GGCGGCGCCG GATCATCGAC
TGGCTCGTCA TCGAGACGCG GGGCGAACGC TTCATCGACA ACATCTTCGT GGAGCTGTGC
AACAGGCTGG TGGAGGCGGG AGTTCCGGTT GCCCGTGCCA CCCTCCATTT CAGGATTCAC
CACCCGCAAT GGCTCGGTGC TCGGATACTG TGGCGAAAGG GACTGTCGGA GGCAGAGCTC
GATACCTACG CCTATGGCGT CGAAGATTCG ATCGAATATC TGAACAGTCC ATTGCGCGAA
TTCAACGAGG GGGCGGAGGA AGTGCGGGGG CATCTCGACG ATCCGCCAGC CTCTGGTAAG
GCATACCCGC TCTACGACGA ACTGCGCGCA GAAGGATTGA CCGATTACCT CATCTGGCCG
CTTTACCATA CGCTCGGCAA ACGCCACGCG ATCACCTTTG CGAGCGACCG ACCAGGCGGC
TTCGGGCCCG ATGACCTGAT CTTTTTGAAG GATATTCTGC CTGCCCTGGC GCTCGTCAGC
GAAATCCGCC TGAAGAACCG CTTCGCCCGC ACGCTCCTCG AAACCTATGT CGGGCCGCAT
GCAAGCGAGC AGATCCTTGC CGGAGCGACC ACGCGCGGCA GCGGGGTGAC GGTCGGCGCC
GCAATTTTGA TCTGCGATCT GCGCGATTTC ACAAAACTGT CGGACCTCTG GCCGCGGGAC
GACGTCATCG AGCTTCTGAA CGGATATTTC GACGCTATGT CGGAACCGAT AGAGCGGCAC
GGCGGAGAGA TACTGAAATT CATGGGCGAC GGGCTGCTGG CGATCTTCCC GCTCAGCAAC
CCCTGTGCCT GCAGTCAGCT TCTCGGAGCC ATCGATGAGG CGCAGGCCGC TCTTGCCGTT
CTCAACGAGG AGAATCTGCG CAAGGGCCAC GATCCGCTCG GCTACGGTAT AGGCGTTCAT
GTCGGCGATG TGATGTACGG CAATATCGGT TCGCGCAGGC GGCTCGATTT CACGGTGATC
GGACCGGCCG TTAACATCGC CTCGCGCCTC GAAACCCTCA CAAAGGAGTT GAAGCGTCCG
GTCCTGCTGT CGAAAGCCTT CGTCGAGAAG GCGGGCTGTG CAGGACAGCT GGAAAATCTG
GGCTCATATG TCTTGCGGGG ACTTGATGAG CCGGTCGACG TTTTTGCTTT TTCGGGCAGA
CGATAG
 
Protein sequence
MTITKPGEAD IALQSPTEPP SNLPDGSEGI WPARRRRIID WLVIETRGER FIDNIFVELC 
NRLVEAGVPV ARATLHFRIH HPQWLGARIL WRKGLSEAEL DTYAYGVEDS IEYLNSPLRE
FNEGAEEVRG HLDDPPASGK AYPLYDELRA EGLTDYLIWP LYHTLGKRHA ITFASDRPGG
FGPDDLIFLK DILPALALVS EIRLKNRFAR TLLETYVGPH ASEQILAGAT TRGSGVTVGA
AILICDLRDF TKLSDLWPRD DVIELLNGYF DAMSEPIERH GGEILKFMGD GLLAIFPLSN
PCACSQLLGA IDEAQAALAV LNEENLRKGH DPLGYGIGVH VGDVMYGNIG SRRRLDFTVI
GPAVNIASRL ETLTKELKRP VLLSKAFVEK AGCAGQLENL GSYVLRGLDE PVDVFAFSGR
R