| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4271 |
|---|
| Symbol | |
|---|
| ID | 5319033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 760529 |
|---|
| End bp | 761086 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640776076 |
|---|
| Product | 3-methyladenine DNA glycosylase |
|---|
| Protein accession | YP_001313009 |
|---|
| Protein GI | 150376413 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2094] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00567] DNA-3-methyladenine glycosylase (3mg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTATCGCT TGAACTCGGA TGTCGAATTT TTTGCGCGCA GCGCCGTGGA AGTGGCGGCC
GATCTCATCG GGTCCGATTT CACTGTCTCC GGTGTCGGCG GCGTCATCGT CGAAACGGAA
GCCTATCTCC CCGACGACGC GGCCTCGCAC AGTTTCGCCG GTACCACGGC GCGCAATCGT
GCGATGTTTG GTCCGCCGGC GCATGCCTAT ATCTACCTCT CCTACGGTCT GCACTGGTGC
CTGAACTTCG TCTGCCTGCC AGGAAGCGCG GTATTGATCC GTGCGATCGA ACCGAAATGG
GGCATCGAGA CGATGCGGGC GAGAAGGGGC GTTCGTGAAG ACAGGCTTTT GTGTTCCGGT
CCGGGGCGTG TCGGCCAGGC GCTGGCGATC AACAGGGAGC AGGATGGCTT GCCGCTCGGG
CGGGATCCAT TCCGCCTCAC CCTGCCCGCC ACGAAGCCGC CTGTTGTCAC CGGCCCGCGG
GTCGGCATCA CCAAGGCCGT GGAGCACCCC TGGCGCTTCG GATTGGCGCG CTCGCCCTTC
GTGAGCCGGA AATTCTGA
|
|---|
| Protein sequence | MYRLNSDVEF FARSAVEVAA DLIGSDFTVS GVGGVIVETE AYLPDDAASH SFAGTTARNR
AMFGPPAHAY IYLSYGLHWC LNFVCLPGSA VLIRAIEPKW GIETMRARRG VREDRLLCSG
PGRVGQALAI NREQDGLPLG RDPFRLTLPA TKPPVVTGPR VGITKAVEHP WRFGLARSPF
VSRKF
|
|---|
| |