Gene Smed_4255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4255 
Symbol 
ID5318468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp742765 
End bp744282 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content65% 
IMG OID640776060 
Producthypothetical protein 
Protein accessionYP_001312993 
Protein GI150376397 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.921544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACTT TCGATTTCCT GTTGCAGGGG CTGCTGGTCG CTGCCCAGCC GATGAACCTG 
CTCTACGCCC TGATCGGCGT AACGCTTGGT ACCGCCGTCG GCGTGCTGCC CGGCATCGGC
CCCGCATTGA CCGTCGCACT GCTTCTGCCG GTCACCTATC AGCTCGATCC GGCCGGGTCG
CTCATCATGT TCGCCGGTAT CTATTATGGC GGCATGTATG GGGGCTCGAC CACGTCGATC
CTGCTCAACA CGCCCGGCGA AAGCGCTTCG ATCGTCACCG CGCTCGAGGG CAACAAGATG
GCGCGCGCCG GCCGCGGTGG CCCAGCGCTC GCCACTGCGG CGATCGGATC CTTCGTCGCC
GGCCTCATCG CCACCCTCGG CCTCGCCTTC ATTGCGCCCT ATATCGTCAA GCTGGCGCTC
GTCTTCGGAC CACGCGAATA TTTCGCGTTG ATGGTGCTCG CCTTCGTGAC CGTCTCGTCC
GCCTTCGGTG ACTCGACGCT GCGTGGGCTC ACCTCGCTTT TCGTCGGCTT GACCCTGGCC
TGTATCGGCA TCGACCAGCT GACCGGCCAG GCGCGCCTTT CCTTCGGAGT ACCCGACCTC
CTCGACGGCA TCGAGGTGAC CACGCTCGCT GTCGCCATGT TCGCCATCGG CGAGACGCTG
TTCATCGCTG CGCAAGGCGA CCGCGGTCCG GACAAGGTGG AAGCGGTCAA GGGCTCGGTC
TGGATGAATG CCGCGGATTG GGGGCGCTCC TGGAAGCCGT GGCTGCGCGG CACCTTTATC
GGCTTTCCTA TCGGCGCCAT GCCGGCCGGC GGCGCCGAGA TCGGCACCTT TCTCTCCTAT
GCAGCCGAGA AGCGCCTGAC CAAGCACCCG GAAGAATTCG GCAACGGCGC CATCGAAGGC
GTTGCAGGTC CCGAGGCCGC CAACAACGCA TCCGCGGCGG GTACGCTTGT GCCGCTCCTG
ACGCTCGGCC TGCCGACGAC CGCTACCGCT GCGATCATGC TGGCCGGGTT CCAGCAATAC
GGGCTGCAGC CGGGGCCGCT GCTTTTCGCC ACCAATCCGC AGCTTGTCTG GGGCCTTATC
GCCAGCCTTC TTATCGCGAA TTTCATGCTG CTCGTCCTCA ACCTGCCGTT GATCGGCCTC
TGGGTGAAGC TCTTGACGAT CCCGAAGCCG TGGCTCTATG CGGGCATCCT GCTTTTCGCG
ACGCTCGGCA CCATCGGCGC CAACCCTTCC GTCTTCGAGC TCGGAATGCT GCTCGCCTTC
GGCCTGCTCG GTTACGTCAT GCGCATCTTC GGCTATCCGA TCGCGCCGGT CGTCGTCGGC
CTCATTCTGG GGCCGCTTGC TGAGCAGCAG CTCCGCAGGG CGCTTTCGAT CAGCCAGGGG
GACGTTACCG TGCTCTTCAC CTCGCCGCTC GCGGCAGTGC TCCTGGTGAT TGCCGCGCTT
GCCTTGATCG TGCCGCTTAT CCTCAGAGCC CGTGGACGCG GTGAAATGCT TGCCCAGCTC
GCCGCCAGCG AAGACTGA
 
Protein sequence
MGTFDFLLQG LLVAAQPMNL LYALIGVTLG TAVGVLPGIG PALTVALLLP VTYQLDPAGS 
LIMFAGIYYG GMYGGSTTSI LLNTPGESAS IVTALEGNKM ARAGRGGPAL ATAAIGSFVA
GLIATLGLAF IAPYIVKLAL VFGPREYFAL MVLAFVTVSS AFGDSTLRGL TSLFVGLTLA
CIGIDQLTGQ ARLSFGVPDL LDGIEVTTLA VAMFAIGETL FIAAQGDRGP DKVEAVKGSV
WMNAADWGRS WKPWLRGTFI GFPIGAMPAG GAEIGTFLSY AAEKRLTKHP EEFGNGAIEG
VAGPEAANNA SAAGTLVPLL TLGLPTTATA AIMLAGFQQY GLQPGPLLFA TNPQLVWGLI
ASLLIANFML LVLNLPLIGL WVKLLTIPKP WLYAGILLFA TLGTIGANPS VFELGMLLAF
GLLGYVMRIF GYPIAPVVVG LILGPLAEQQ LRRALSISQG DVTVLFTSPL AAVLLVIAAL
ALIVPLILRA RGRGEMLAQL AASED