Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4255 |
Symbol | |
ID | 5318468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 742765 |
End bp | 744282 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640776060 |
Product | hypothetical protein |
Protein accession | YP_001312993 |
Protein GI | 150376397 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.921544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTACTT TCGATTTCCT GTTGCAGGGG CTGCTGGTCG CTGCCCAGCC GATGAACCTG CTCTACGCCC TGATCGGCGT AACGCTTGGT ACCGCCGTCG GCGTGCTGCC CGGCATCGGC CCCGCATTGA CCGTCGCACT GCTTCTGCCG GTCACCTATC AGCTCGATCC GGCCGGGTCG CTCATCATGT TCGCCGGTAT CTATTATGGC GGCATGTATG GGGGCTCGAC CACGTCGATC CTGCTCAACA CGCCCGGCGA AAGCGCTTCG ATCGTCACCG CGCTCGAGGG CAACAAGATG GCGCGCGCCG GCCGCGGTGG CCCAGCGCTC GCCACTGCGG CGATCGGATC CTTCGTCGCC GGCCTCATCG CCACCCTCGG CCTCGCCTTC ATTGCGCCCT ATATCGTCAA GCTGGCGCTC GTCTTCGGAC CACGCGAATA TTTCGCGTTG ATGGTGCTCG CCTTCGTGAC CGTCTCGTCC GCCTTCGGTG ACTCGACGCT GCGTGGGCTC ACCTCGCTTT TCGTCGGCTT GACCCTGGCC TGTATCGGCA TCGACCAGCT GACCGGCCAG GCGCGCCTTT CCTTCGGAGT ACCCGACCTC CTCGACGGCA TCGAGGTGAC CACGCTCGCT GTCGCCATGT TCGCCATCGG CGAGACGCTG TTCATCGCTG CGCAAGGCGA CCGCGGTCCG GACAAGGTGG AAGCGGTCAA GGGCTCGGTC TGGATGAATG CCGCGGATTG GGGGCGCTCC TGGAAGCCGT GGCTGCGCGG CACCTTTATC GGCTTTCCTA TCGGCGCCAT GCCGGCCGGC GGCGCCGAGA TCGGCACCTT TCTCTCCTAT GCAGCCGAGA AGCGCCTGAC CAAGCACCCG GAAGAATTCG GCAACGGCGC CATCGAAGGC GTTGCAGGTC CCGAGGCCGC CAACAACGCA TCCGCGGCGG GTACGCTTGT GCCGCTCCTG ACGCTCGGCC TGCCGACGAC CGCTACCGCT GCGATCATGC TGGCCGGGTT CCAGCAATAC GGGCTGCAGC CGGGGCCGCT GCTTTTCGCC ACCAATCCGC AGCTTGTCTG GGGCCTTATC GCCAGCCTTC TTATCGCGAA TTTCATGCTG CTCGTCCTCA ACCTGCCGTT GATCGGCCTC TGGGTGAAGC TCTTGACGAT CCCGAAGCCG TGGCTCTATG CGGGCATCCT GCTTTTCGCG ACGCTCGGCA CCATCGGCGC CAACCCTTCC GTCTTCGAGC TCGGAATGCT GCTCGCCTTC GGCCTGCTCG GTTACGTCAT GCGCATCTTC GGCTATCCGA TCGCGCCGGT CGTCGTCGGC CTCATTCTGG GGCCGCTTGC TGAGCAGCAG CTCCGCAGGG CGCTTTCGAT CAGCCAGGGG GACGTTACCG TGCTCTTCAC CTCGCCGCTC GCGGCAGTGC TCCTGGTGAT TGCCGCGCTT GCCTTGATCG TGCCGCTTAT CCTCAGAGCC CGTGGACGCG GTGAAATGCT TGCCCAGCTC GCCGCCAGCG AAGACTGA
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Protein sequence | MGTFDFLLQG LLVAAQPMNL LYALIGVTLG TAVGVLPGIG PALTVALLLP VTYQLDPAGS LIMFAGIYYG GMYGGSTTSI LLNTPGESAS IVTALEGNKM ARAGRGGPAL ATAAIGSFVA GLIATLGLAF IAPYIVKLAL VFGPREYFAL MVLAFVTVSS AFGDSTLRGL TSLFVGLTLA CIGIDQLTGQ ARLSFGVPDL LDGIEVTTLA VAMFAIGETL FIAAQGDRGP DKVEAVKGSV WMNAADWGRS WKPWLRGTFI GFPIGAMPAG GAEIGTFLSY AAEKRLTKHP EEFGNGAIEG VAGPEAANNA SAAGTLVPLL TLGLPTTATA AIMLAGFQQY GLQPGPLLFA TNPQLVWGLI ASLLIANFML LVLNLPLIGL WVKLLTIPKP WLYAGILLFA TLGTIGANPS VFELGMLLAF GLLGYVMRIF GYPIAPVVVG LILGPLAEQQ LRRALSISQG DVTVLFTSPL AAVLLVIAAL ALIVPLILRA RGRGEMLAQL AASED
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