Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4247 |
Symbol | |
ID | 5318008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 733651 |
End bp | 734700 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776052 |
Product | alanine racemase |
Protein accession | YP_001312985 |
Protein GI | 150376389 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.645123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGGCG GCGCAAACAA GGCTGCAACG ATCCGGGAGG TGGCGGCGCT TGCCGGCGTG GCGCCCGGGA CGGTTTCCAA TGTGCTCACG GGCAAGAAAC TCGTGGCCGA ACCCCTGCGC AAGGCCGTCC TCGACGCCAT TGCTCAACTC GACTACCGGC CGAATCATCT GGCTTCGAGC CTGCGTTTCG GCCGGACAAA ATCCATCGGC ATCGTCGTGC CGGACATGAC CAACCCGTTT TTTTCAGGGC TTGTCCGCGA ACTGGAACTC AAGGCTGCCA AATCCGGCTT TCAGATCCTG CTCATGAGCA GCTACGAGGA GGCAGCGGAG GAACGAGAAC GTATTCGCGC ACTTGTTTCA CGACAGGTCG ACGGATTGAT CATATCGCCA AGCAGGGACT CCATCGAGAC CTCGCCGCAC TCCGCCATCA GCGGCATTCC TACGGTGCTG GTCGACCGTG CCTTTGCGGT CGAAGGCTTC GACACGGTCT CGGCCGACAA CGAACAGGCG ACACTGATGG GAGCCCGGCA CCTGATCGAG CTCGGTCACA AGCGCATCAC CTTTCTCGCG ACCGCGCCGG GGCTCGCCAA CATGGAGGAG CGCGTTTCCG GCTACCGTAA GGCGATGCAG GACGCGGGCG TCTCCGATGC GAATGTGGTC TATGGAGGCC TGAGCATCGA GAGCTGCCGC AGCGCCATCG AGCAGGAACT CCGAAGGGCC GGCCGGCCGA CTGCGGTCTT CGCGTCGGCC TATGTCGCGA CCTTGGGCGC CGCAAAGGCG ATCAGGGCGC TGGACCTCGC ATTCCCGCAA GACGTGTCTT TGCTCGGCTT CGACGACTCC GACTGGATGA CCGTCCTGCG CCCCTATGTC AGCACGATCG AGCAGCCGTT GGACGAGCTC GGCCATGCGT GCTGGGAGCT GCTCCAGCGG CGCATGAAAA AGATGGACGT GCCCCCCGTC CACAGGCGGA TCGCCTGCAC CTTGCGCGCA AGGGAGTCGA CCCGCCGCAT CCGGCGAAAA TCGGGGCCAC GCTCGCGCTC TGAAGTCTGA
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Protein sequence | MVGGANKAAT IREVAALAGV APGTVSNVLT GKKLVAEPLR KAVLDAIAQL DYRPNHLASS LRFGRTKSIG IVVPDMTNPF FSGLVRELEL KAAKSGFQIL LMSSYEEAAE ERERIRALVS RQVDGLIISP SRDSIETSPH SAISGIPTVL VDRAFAVEGF DTVSADNEQA TLMGARHLIE LGHKRITFLA TAPGLANMEE RVSGYRKAMQ DAGVSDANVV YGGLSIESCR SAIEQELRRA GRPTAVFASA YVATLGAAKA IRALDLAFPQ DVSLLGFDDS DWMTVLRPYV STIEQPLDEL GHACWELLQR RMKKMDVPPV HRRIACTLRA RESTRRIRRK SGPRSRSEV
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