Gene Smed_4247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4247 
Symbol 
ID5318008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp733651 
End bp734700 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID640776052 
Productalanine racemase 
Protein accessionYP_001312985 
Protein GI150376389 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.645123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGCG GCGCAAACAA GGCTGCAACG ATCCGGGAGG TGGCGGCGCT TGCCGGCGTG 
GCGCCCGGGA CGGTTTCCAA TGTGCTCACG GGCAAGAAAC TCGTGGCCGA ACCCCTGCGC
AAGGCCGTCC TCGACGCCAT TGCTCAACTC GACTACCGGC CGAATCATCT GGCTTCGAGC
CTGCGTTTCG GCCGGACAAA ATCCATCGGC ATCGTCGTGC CGGACATGAC CAACCCGTTT
TTTTCAGGGC TTGTCCGCGA ACTGGAACTC AAGGCTGCCA AATCCGGCTT TCAGATCCTG
CTCATGAGCA GCTACGAGGA GGCAGCGGAG GAACGAGAAC GTATTCGCGC ACTTGTTTCA
CGACAGGTCG ACGGATTGAT CATATCGCCA AGCAGGGACT CCATCGAGAC CTCGCCGCAC
TCCGCCATCA GCGGCATTCC TACGGTGCTG GTCGACCGTG CCTTTGCGGT CGAAGGCTTC
GACACGGTCT CGGCCGACAA CGAACAGGCG ACACTGATGG GAGCCCGGCA CCTGATCGAG
CTCGGTCACA AGCGCATCAC CTTTCTCGCG ACCGCGCCGG GGCTCGCCAA CATGGAGGAG
CGCGTTTCCG GCTACCGTAA GGCGATGCAG GACGCGGGCG TCTCCGATGC GAATGTGGTC
TATGGAGGCC TGAGCATCGA GAGCTGCCGC AGCGCCATCG AGCAGGAACT CCGAAGGGCC
GGCCGGCCGA CTGCGGTCTT CGCGTCGGCC TATGTCGCGA CCTTGGGCGC CGCAAAGGCG
ATCAGGGCGC TGGACCTCGC ATTCCCGCAA GACGTGTCTT TGCTCGGCTT CGACGACTCC
GACTGGATGA CCGTCCTGCG CCCCTATGTC AGCACGATCG AGCAGCCGTT GGACGAGCTC
GGCCATGCGT GCTGGGAGCT GCTCCAGCGG CGCATGAAAA AGATGGACGT GCCCCCCGTC
CACAGGCGGA TCGCCTGCAC CTTGCGCGCA AGGGAGTCGA CCCGCCGCAT CCGGCGAAAA
TCGGGGCCAC GCTCGCGCTC TGAAGTCTGA
 
Protein sequence
MVGGANKAAT IREVAALAGV APGTVSNVLT GKKLVAEPLR KAVLDAIAQL DYRPNHLASS 
LRFGRTKSIG IVVPDMTNPF FSGLVRELEL KAAKSGFQIL LMSSYEEAAE ERERIRALVS
RQVDGLIISP SRDSIETSPH SAISGIPTVL VDRAFAVEGF DTVSADNEQA TLMGARHLIE
LGHKRITFLA TAPGLANMEE RVSGYRKAMQ DAGVSDANVV YGGLSIESCR SAIEQELRRA
GRPTAVFASA YVATLGAAKA IRALDLAFPQ DVSLLGFDDS DWMTVLRPYV STIEQPLDEL
GHACWELLQR RMKKMDVPPV HRRIACTLRA RESTRRIRRK SGPRSRSEV