Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4245 |
Symbol | |
ID | 5318006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 730480 |
End bp | 731940 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640776050 |
Product | mannitol dehydrogenase domain-containing protein |
Protein accession | YP_001312983 |
Protein GI | 150376387 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.101658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTT CGCAAGAGAC GCTCGACCGC CTGCCCGCCT CCGTCAAAAG CCCCGCATAC GACCTCGGAG CTGTTGCCGT CGGCATCGTC CATCTCGGCA TCGGCGCCTT TCATCGCGCG CATCAGGCCG CCTTGACCGA TGCCCTGCTT GCAGAAGACC CCTCCTGGGG CATCTGCGGC GTATCGCTGC GCAGCCCGGA CACGCGCGAT GCTCTTCGGC CGCAGGACGG GCTTTATACG CTCGCCGTAA AGGACGGCGC GGGGACCGAC TTCAGCGTGA TCGGCAGCGT CGTCGAGCTC TTATGCGCGC CGGAAGACCC GGAGGCCGTC CTTCGCCGCA TGGCCGATCC GGCCACGCGC ATCGTGTCGT TGACAATCAC CGAGAAGGGC TATTGCCATA ATCCCGCGAC CGGGACGCTC GACGAAAACC ACCCGGATAT CGCCCACGAT CTCGCCAATC CGGCGTGCCC GCGCTCGGCA ATCGGTTTCA TTGTCGAGGC GATTTCGCGC CGCGTCCGCG CCGGTATCGC GCCGTTCGCG CTGCTGTCCT GCGACAATCT TCCCGGCAAC GGCAACGTCC TGAAACGTAT CGTCGAGCAG TTCGCGGAGT TGCGCGATCC GGCCCTTGCC GCCTTGGTCC GCAATGTGGC CTCGCCATCG ACGATGGTCG ACCGCATCGT TCCGGCAACG ACGGATGCCG ACCGGAGCGC GGTCGCCGAG GCTCTGGGTC TTGAAGATGC CTGGCCGATC ATGACCGAAC CCTTCCGGCA ATGGGTGATA GAGGACGATT TCCCGCTCGG CCGTCCTGCC TGGGAAAAGG CCGGCGCGCT CTTCGTCGAT GACGTCTCCG CCTTTGAGTT CATGAAGCTC CGGCTTCTGA ACGGAAGCCA TTCGACGCTC GCCTATCTCG GCTATCTCGC AGGCGCCGAG ACGGTGGCGG ATGCGATGGC CCTCCCGGGC ATGCAAGCAT TGATCGAAGG ATTGATGCGT GAAGAGGTCA GCCCCACGCT TCCGGAACTG CCGGGTTTCG ACCTTCCGGC CTACCGGTCC GAACTGCTCC TGCGCTTTCG CAATCCGGCG CTTCGTCACC GCACCTGGCA GATCGCCATG GACGGCTCGC AGAAGTTGCC GCAGCGCCTT CTCGGCACGA TCCGCGACCG GTTGCAGGCA GGGGCCGGCT ATGACCGGCT GGCGCTGGGA GTCGCTGCCT GGATGCGATA TGCGCGGGGC CTGGACGAGG CGGGCGGGAC CATCGACGTT CGCGATCCGC ATGCAGGCCG CATCGCCGAA CTCGCCCGCG GACTTGACGA GCCGGATCGC ATCGTCGATG CCCTTTTGAC GATGGCGGAC GTCTTCGGCA CGGATCTTCC GGCCAGCGCT CCCTTCCGCT CCGCGCTCAT CAAGGCGCTG GCGGGTCTCC TGCAGCATGG ATCTGCGGCA ACGCTCAGAA GCTACGCCTG A
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Protein sequence | MRLSQETLDR LPASVKSPAY DLGAVAVGIV HLGIGAFHRA HQAALTDALL AEDPSWGICG VSLRSPDTRD ALRPQDGLYT LAVKDGAGTD FSVIGSVVEL LCAPEDPEAV LRRMADPATR IVSLTITEKG YCHNPATGTL DENHPDIAHD LANPACPRSA IGFIVEAISR RVRAGIAPFA LLSCDNLPGN GNVLKRIVEQ FAELRDPALA ALVRNVASPS TMVDRIVPAT TDADRSAVAE ALGLEDAWPI MTEPFRQWVI EDDFPLGRPA WEKAGALFVD DVSAFEFMKL RLLNGSHSTL AYLGYLAGAE TVADAMALPG MQALIEGLMR EEVSPTLPEL PGFDLPAYRS ELLLRFRNPA LRHRTWQIAM DGSQKLPQRL LGTIRDRLQA GAGYDRLALG VAAWMRYARG LDEAGGTIDV RDPHAGRIAE LARGLDEPDR IVDALLTMAD VFGTDLPASA PFRSALIKAL AGLLQHGSAA TLRSYA
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