| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4244 |
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| Symbol | |
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| ID | 5318005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 729685 |
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| End bp | 730434 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640776049 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001312982 |
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| Protein GI | 150376386 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.149291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACC TCAACGGCAA AACTGCTCTG GTTACCGGCG GCGGACGTGG GCTCGGCCTT
GAGATTGCCA AGGCGCTTGC CAGGGCCGGC GCCTGGACCG TGATCAACGG CCGCAATCGC
CAAAACCTTG AAGAGGCGCG CGCGCGGCTG GCACGCGATG GCATCGAGAC CGGCATCGCA
CCCGGCGACA TAACCCGCGA TGCAGATGCG ATTGTTGCCG CAGCGGTCGA GAAGACAGGC
GGGCTCGACA TTCTGCTTCA TGCGGTCGGG GAACGCGACC GCCGTGGCAC GGAAGCGATG
GAGCCGCACG AATTCGCGGC GCTATTGAAC ACCGACCTTA CCGCGGCCTA TGCCATGGCA
AGGGCCGCGC TGCCGCATCT CCGGCGTTCG GCCGCCGGAC GACTGATTTT CGTGACCTCG
ATTGCCGCCT TCGCGGCGCG GGCCGGTGAT CCCGCCTATA CGGCGGCGAA GGGCGGCCTC
TCGGCGCTAA CTCGCTCACT TGCTGTCGAG CTCGGAGCCG ACAATCTCAC CGTCAACGCG
ATCGCGCCTG GCTGGTTCGC AACCGAAACC AACGCGCATC TCGCAGCCGA CCCGGCACTC
ACGGCTTTCG TCGACATGCG CATTCCGCTG AAGCGGTGGG GTCGGCCGGA AGAGATCGCG
CCTGCCGCCG TGTTCCTTGC CTCGCCCGCT GCGAGTTTCG TCAACGGCAC CACGCTCACA
GTCGACGGCG GGATGACGGT ACAGATGTAA
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| Protein sequence | MFDLNGKTAL VTGGGRGLGL EIAKALARAG AWTVINGRNR QNLEEARARL ARDGIETGIA
PGDITRDADA IVAAAVEKTG GLDILLHAVG ERDRRGTEAM EPHEFAALLN TDLTAAYAMA
RAALPHLRRS AAGRLIFVTS IAAFAARAGD PAYTAAKGGL SALTRSLAVE LGADNLTVNA
IAPGWFATET NAHLAADPAL TAFVDMRIPL KRWGRPEEIA PAAVFLASPA ASFVNGTTLT
VDGGMTVQM
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