Gene Smed_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4239 
Symbol 
ID5318000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp723158 
End bp724690 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content63% 
IMG OID640776044 
Productcarboxyl transferase 
Protein accessionYP_001312977 
Protein GI150376381 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.540833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGA TACTTGAACA GGTGGAAGCC CGGCGGGCCG AGGCAAGGGT CGGCGGCGGC 
GAACGTCGCA TCGCCGCGCA GCACGGCAAA GGCAAGCTGA CGGCACGCGA GCGCATCGAC
GTGCTTCTCG ACGAGGGCTC CTTCGAAGAA TACGACATGT ATGTGACGCA TCGTTGCGTC
GATTTCGACA TGGGTAGCCA GAAGATCGCC GGCGACGGCG TCGTCACCGG CTGGGGCACG
ATCAACGGCC GACAGGTCTA TGTCTTCAGC CAGGACTTCA CCGTCCTCGG GGGCTCGCTT
TCGGAGACGC ATGCGCAGAA GATCTGCAAG ATCATGGATA TGGCTGCAAG GAACGGTGCG
CCGGTCATCG GCCTCAACGA TTCCGGCGGC GCCCGCATCC AGGAAGGCGT TTCGTCGCTT
GCCGGCTATG CCGAGGTCTT CCGCCGCAAT GCAGAGGTCT CGGGCGTCAT TCCGCAAATC
TCGGTGATCA TGGGCCCCTG TGCTGGCGGA GCCGTCTATT CGCCGGCGAT GACGGATTTC
ATCTTCATGG TGCGCGACAG TTCCTACATG TTCGTGACCG GGCCGGACGT CGTGAAGACG
GTCACCAATG AGATCGTCAC CGCGGAGGAA CTCGGCGGTG CCCGCACGCA TACGACGAAA
TCCTCCGTCG CCGACGGTGC CTATGAAAAC GACATAGAGG CGCTCGAGCA CGTCCGGCTG
TTGTTCGACT TCCTGCCGCT CAACAATCGC GAGAAGCCTC CGGTCCGGCC CTTCCATGAC
GATCCGGGGC GCATCGAGAT GCGGCTCGAC AGCCTGATCC CGGACAGTGC CGCCAAGCCC
TACGACATGA AGGAACTGAT CATCGCCATT GCCGACGAGG GCGACTTCTT CGAACTGCAG
GCAAGCTTCG CCCGGAACAT CATAACGGGC TTCATCCGCA TCGAGGGCCA GACGGTCGGC
GTCGTGGCCA ACCAGCCGTT GGTGCTCGCC GGCTGCCTCG ATATCGACTC CTCGCGCAAG
GCCGCACGCT TCGTCCGCTT CTGCGACGCG TTCTCCATCC CGATCCTGAC GCTTGTCGAT
GTGCCCGGCT TCCTTCCCGG CACCGCCCAG GAATATGGCG GCGTCATCAA GCACGGCGCC
AAGCTGCTTT TCGCCTACAG TCAGGCGACG GTCCCCATGG TGACCCTGAT CACCCGCAAG
GCCTATGGCG GCGCCTATGA CGTCATGGCG TCCAAACACA TCGGCGCCGA TGTGAATTAC
GCCTGGCCGA CGGCCGAGAT CGCCGTGATG GGAGCCAAGG GCGCGACCGA AATCCTCTAC
CGGTCCGAGC TCGGCGACAA GGAGAAGATC GCCGCGCGGA CGAAGGAATA CGAGGAGCGC
TTCGCCAATC CCTTCGTTGC CGCAGAGCGC GGCTTCATCG ACGAGGTGAT CATGCCGCAT
TCCTCCCGCC GTCGCATTGC CCGTGCCTTC GCGTCTCTGC GCAGCAAGCA GCTGGAGACC
CGGTGGCGCA AGCACGACAC GATCCCGCTT TGA
 
Protein sequence
MRAILEQVEA RRAEARVGGG ERRIAAQHGK GKLTARERID VLLDEGSFEE YDMYVTHRCV 
DFDMGSQKIA GDGVVTGWGT INGRQVYVFS QDFTVLGGSL SETHAQKICK IMDMAARNGA
PVIGLNDSGG ARIQEGVSSL AGYAEVFRRN AEVSGVIPQI SVIMGPCAGG AVYSPAMTDF
IFMVRDSSYM FVTGPDVVKT VTNEIVTAEE LGGARTHTTK SSVADGAYEN DIEALEHVRL
LFDFLPLNNR EKPPVRPFHD DPGRIEMRLD SLIPDSAAKP YDMKELIIAI ADEGDFFELQ
ASFARNIITG FIRIEGQTVG VVANQPLVLA GCLDIDSSRK AARFVRFCDA FSIPILTLVD
VPGFLPGTAQ EYGGVIKHGA KLLFAYSQAT VPMVTLITRK AYGGAYDVMA SKHIGADVNY
AWPTAEIAVM GAKGATEILY RSELGDKEKI AARTKEYEER FANPFVAAER GFIDEVIMPH
SSRRRIARAF ASLRSKQLET RWRKHDTIPL