| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4231 |
|---|
| Symbol | phnK |
|---|
| ID | 5318275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 714218 |
|---|
| End bp | 714994 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640776036 |
|---|
| Product | phosphonate C-P lyase system protein PhnK |
|---|
| Protein accession | YP_001312969 |
|---|
| Protein GI | 150376373 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4107] ABC-type phosphonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.503556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG TGCCGCTTCT GAAAGTCAGT GACGTCTCGA AATTCTATGG AAGCCGCATC
GGCTGCCGCA ACGTCTCCTT CGAACTTTAT CCGGGCGAAG TGCTCGCCAT CGTCGGAGAA
TCCGGTTCCG GCAAGACCAC CCTGCTTTCC TGCCTCTCGA CCCGGCTGAT GCCCACCTCC
GGCGTCGTCG AGTACCACAT GCGCGATGGC CAGTATCGGG ACCTCGCGCG CATGAGCGAG
GCGGAGCGCC GCTTCCTCAT GCGCACCGAC TGGGGTTTCG TCCACCAGAA CCCCGCCGAT
GGCTTGAGGA TGACGGTTTC TGCCGGCGCC AATGTCGGCG AGCGGCTGAT GGCGGTCGGC
GACCGACACT ACGGCAATAT CCGCGCGGCG GCCGGCGACT GGCTGAGGCG CGTGGAAATC
GAAGAGGACC GGATCGACGA CCAGCCGCGC GCCTTCTCCG GCGGCATGCG CCAGCGCCTG
CAGATCGCCC GTAATCTGGT CACCTCTCCC CGCCTCGTCT TCATGGACGA GCCGACCGGC
GGTCTCGACG TCTCCGTACA GGCGCGTCTG CTCGACCTGG TTCGCGGGCT CGTCCACGAT
CTCGGCCTGG CGGCGGTGAT CGTCACCCAT GATCTCGCCG TGGCGCGGCT CCTTTCGCAC
CGGATGATGG TGATGAAGGA CGGCGCCGTC ATCGAGCAGG GTCTGACCGA CCGGGTGCTC
GACGATCCGC GAGAGCCCTA CACGCAGCTC CTCGTTTCCT CGATTTTGCA GGTCTGA
|
|---|
| Protein sequence | MSAVPLLKVS DVSKFYGSRI GCRNVSFELY PGEVLAIVGE SGSGKTTLLS CLSTRLMPTS
GVVEYHMRDG QYRDLARMSE AERRFLMRTD WGFVHQNPAD GLRMTVSAGA NVGERLMAVG
DRHYGNIRAA AGDWLRRVEI EEDRIDDQPR AFSGGMRQRL QIARNLVTSP RLVFMDEPTG
GLDVSVQARL LDLVRGLVHD LGLAAVIVTH DLAVARLLSH RMMVMKDGAV IEQGLTDRVL
DDPREPYTQL LVSSILQV
|
|---|
| |