Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4230 |
Symbol | |
ID | 5318274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 713448 |
End bp | 714155 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640776035 |
Product | phosphonate C-P lyase system protein PhnL |
Protein accession | YP_001312968 |
Protein GI | 150376372 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4778] ABC-type phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02324] phosphonate C-P lyase system protein PhnL |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.385818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTACTC CGCTCGTTGT CTCAGAAGTC GCGAAAAGCT TCACCATGCA CTTGCGCGAC GGCGTCCGCC TGCCGGTGGT CGCGAATGTT TCCTTCTCGG TGAGGGCCGG CGAATGCGTC GTACTCGGCG GCCCCTCCGG CGTCGGCAAG AGCTCGATCC TCAAGATGCT CTACGGAAAT TACGGCGTCG ACGAAGGCCA GATCCTGGTC GAACATGACG GCCGGCTGGT CAATCTCGCA ACGGCCGAGC CGCGTACCGT GCTCGAGGTG CGCCGCGCGA CGCTCGGCTA TGTCAGCCAG TTCCTACGCG TCGTGCCCCG CGTCTGCGCC CTCGATATCG TCGCCGAGCC CCTGCAGGCG CGCGGTGTCA CGGCCGGCGA CGCGCGGGAA CGCGCGGCCG AACTGCTTTC GAAGCTCAAC CTGCCGAAGG AACTCTGGTC GCTGCCGCCG GCCACCTTCT CGGGCGGTGA GCAGCAGCGC GTCAACATCG CCCGCGGCTT CATCACCGAT CACAAGATCC TTCTTCTCGA CGAACCGACC GCCTCCCTCG ATGCGAAGAA CCGCGCCGTG GTGGTGGAGA TGATCGCCGC GAAAAAGTCG GCGGGAACGG CGCTGATCGG CATTTTCCAC GACGAGGAAG TGCGCGAGGC AGTTGCCGAC CGCATCATCG ACGTCTCGGA ATTCTCGCCG AGGAGATACG CCGCATGA
|
Protein sequence | MATPLVVSEV AKSFTMHLRD GVRLPVVANV SFSVRAGECV VLGGPSGVGK SSILKMLYGN YGVDEGQILV EHDGRLVNLA TAEPRTVLEV RRATLGYVSQ FLRVVPRVCA LDIVAEPLQA RGVTAGDARE RAAELLSKLN LPKELWSLPP ATFSGGEQQR VNIARGFITD HKILLLDEPT ASLDAKNRAV VVEMIAAKKS AGTALIGIFH DEEVREAVAD RIIDVSEFSP RRYAA
|
| |