| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4223 |
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| Symbol | pdxA |
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| ID | 5319297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 705785 |
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| End bp | 706831 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640776028 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001312961 |
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| Protein GI | 150376365 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.331235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC CAGGAGCGGA CGGAACGGAG GAGCGGCGCA CCGTGATTGC GCTGGCGATG
GGCGACCCCG CCGGGATCAG CCCGGAGCTG ACGGCGCGGC TGCTTGCCCT TTCCGACATC
CGCGAGGCGG TGCATATCAT TGCCATCGGC GATCGCCGCA TCCTTGATGA GGGCGCCCGG
GTGGCCGGCG TCACGCTGGA TCTGGAATCG GTTTCACTCG ATTCGCTTGA CAGGTCCGGC
ACGGCGCGCC ACGTCTTCGT GGATCTCGCC CATCTCGATC CGGCCGATGT AGTGCGCGGA
GAGGCGACGC TTGCCGGCGG CACCTTCGCC ACGCGAAATT TCCGCACGGC GCTCGAACTC
GCCCATGCCG GCAAGGCCGA AGCCGTCTGC TTCACGCCCT TCAACAAGAA GGCGATGCGC
TTTGCCTATC CAGGCTATGA CGACGAGATC CGCTTCGTCG CCGACGTGCT TTCCTTCACC
GGAAAAGTTC GTGAATTCAA CGTTCTCGAG AAGGTTTGGA ACGCGCGGGT GACCTCGCAT
ATCCCGCTCA AGGATGTGGC AGCCCACCTG TCGGTGGATG CGATCCTCGC CGAAATCAAT
CTGACGCAGG CCTGCCTCAA GGATGCCGGC TACGAGGAAG CGAGAATTGC GGTTGCGGGG
CTCAATCCGC ATGCCGGCGA CGGCGGCAGC TTCGGCATGG AAGAGATCGA CATCATCGAG
CCGGCGGTCG AGAAGGCCAG GGCCCTCGGA TTCAATGTCG AGGGGCCGTT CCCGGCTGAC
ACGGTCTTCC TCAGGGCGCT GAAGGAAGGC TTCAATGCCG TGATGACCAT GTATCACGAC
CAGGGTCAGA TCGCCATGAA GATCATCGGT TTCGACAAGG GCGTGACGAT GATGGGCGGG
CTGGCGTTCC CGCTCTGCAC GCCTGCGCAT GGCACGGCTT ACGACATCGC CGGCAAGGGC
ATCGCCGATA TCGGCGCCAC TCGCGAGGCG ATCCTGCTCG CCGCTCGAAT GGCGAAGAAA
AAGCGGGCGC TTCCGGCGGC TGCCTGA
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| Protein sequence | MTTPGADGTE ERRTVIALAM GDPAGISPEL TARLLALSDI REAVHIIAIG DRRILDEGAR
VAGVTLDLES VSLDSLDRSG TARHVFVDLA HLDPADVVRG EATLAGGTFA TRNFRTALEL
AHAGKAEAVC FTPFNKKAMR FAYPGYDDEI RFVADVLSFT GKVREFNVLE KVWNARVTSH
IPLKDVAAHL SVDAILAEIN LTQACLKDAG YEEARIAVAG LNPHAGDGGS FGMEEIDIIE
PAVEKARALG FNVEGPFPAD TVFLRALKEG FNAVMTMYHD QGQIAMKIIG FDKGVTMMGG
LAFPLCTPAH GTAYDIAGKG IADIGATREA ILLAARMAKK KRALPAAA
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