| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4209 |
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| Symbol | |
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| ID | 5319219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 690701 |
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| End bp | 691315 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776014 |
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| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
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| Protein accession | YP_001312947 |
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| Protein GI | 150376351 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTCAGG ATCTCGGCTA TCTTAAGGAA ACCGCGTCAC AGACTGCCGG GCCCTATGTT
CATATCGGCC TGACGCCCAA TTTCTGCGGG ATTGGCGGGG TCTACGAAGC CGACCTCGGC
GCTTCTATGG TCAACGACCG GACACTCGGA CAACGCATTA CCGTGACCGG CCGCGTGATC
GATGGGGCCG GTATGCCGCT CAAGGACGCA CTCCTGGAAA TCTGGCAGGC GGATGCCGCC
GGGCTCTATA ATTCCCCGTC CGAGAGGCGC GGCGCGGCGG ATCCGAATTT CGCCGGCTGG
GGACGCTCGC CGACGGGCGC CGACGATGGC ATGTTCACCT TTGAGACGGT GAAGCCGGGC
CGTGTTCCCT TCCACGACGG CCGGCTGATG GCGCCGCATA TCAGTTTCTG GATCGTCGCG
CGCGGCATCA ATATCGGCCT TCACACCCGC ATGTATTTCC CCGACGAGGC GGTGGCGAAC
GCCGCTGACC CGCTCCTTGC CCGCATCGAG CACCGCCACC GGGCCGAGAC GCTTGTCGCG
GCGGGTCGGA CGCCTAATTA TGTTTTCGAC ATTCATCTCC AGGGCGAGAA GGAAACCGTC
TTCCTGGATA TATGA
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| Protein sequence | MAQDLGYLKE TASQTAGPYV HIGLTPNFCG IGGVYEADLG ASMVNDRTLG QRITVTGRVI
DGAGMPLKDA LLEIWQADAA GLYNSPSERR GAADPNFAGW GRSPTGADDG MFTFETVKPG
RVPFHDGRLM APHISFWIVA RGINIGLHTR MYFPDEAVAN AADPLLARIE HRHRAETLVA
AGRTPNYVFD IHLQGEKETV FLDI
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