| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4208 |
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| Symbol | |
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| ID | 5319103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 689929 |
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| End bp | 690690 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776013 |
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| Product | protocatechuate 3,4-dioxygenase, beta subunit |
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| Protein accession | YP_001312946 |
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| Protein GI | 150376350 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAG ATCAGAGCGG CGGAGAGAAC GACAGGCCCG AAACGGGCGC CTTTTTTGCC
CGGGACCGCG CATGGCATCC GCCGGCTTTC GCGCCCGGAT ACAAGAGCTC GGTGCTGCGC
TCACCGCAAA AGGCGCTGCT TTCGCTCGAT GGCACCCTGT CGGAGATCAC CGGCCCGGTC
TTCGGCCATT CCATGCTCGG CGAACTTGAC AATGACCTGA TCCATAATTT CGCCAAGCCT
GGCGAAAGCG CGATCGGCGA ACGCATCATC GTCCATGGGC GGGTGCTCGA CGAGCGCGGC
CGCCCGGTCC AGGACGCGCT CGTCGAGTTC TGGCAGGCGA ATGCCGGCGG CCGCTACCGT
CACAGGAAGG AAAGCTATCT CGCGGCGCTC GACCCGAATT TCGGCGGCTG CGGCAGGGCG
ATCACCAATG GGGATGGCCA CTATTGCTTC CGCACGGTGA AGCCCGGCGC CTATCCCTGG
CCGAACGGCG TCAACGATTG GCGGCCCGCC CATATTCACT TTTCGATCTT CGGCCACGGT
TTCGCCCAGC GTCTCATCAC GCAGATGTAT TTCGAGGGCG ATCCGATGAT CTGGAAGTGT
CCTATCGTAG GCGCCATTCC CGACCGCAGG GCGATCGAGC AACTGATCGC CGCACTCGAT
TGGGGTAATA CGGTGCCGAT GGATGCCCGT GCCTACAAGT TCGATATCGT CCTGCGCGGC
CGTCGCTCGA CCTTCTTCGA GAATAGACCC GAGGGGAATT AA
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| Protein sequence | MSGDQSGGEN DRPETGAFFA RDRAWHPPAF APGYKSSVLR SPQKALLSLD GTLSEITGPV
FGHSMLGELD NDLIHNFAKP GESAIGERII VHGRVLDERG RPVQDALVEF WQANAGGRYR
HRKESYLAAL DPNFGGCGRA ITNGDGHYCF RTVKPGAYPW PNGVNDWRPA HIHFSIFGHG
FAQRLITQMY FEGDPMIWKC PIVGAIPDRR AIEQLIAALD WGNTVPMDAR AYKFDIVLRG
RRSTFFENRP EGN
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