| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4191 |
|---|
| Symbol | |
|---|
| ID | 5318949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 670531 |
|---|
| End bp | 671793 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640775996 |
|---|
| Product | cobyrinic acid ac-diamide synthase |
|---|
| Protein accession | YP_001312929 |
|---|
| Protein GI | 150376333 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | [TIGR03453] plasmid partitioning protein RepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.901272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.680764 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGA AGGTATCGGC AGCGCAGACG ACTGCCGCGG GCGGCGCGGC GTTCGGCAGG
CCGGCAGACG AGGCGATTGC CGCCGATGCG CGAGCGCTGT CCGAACAGCT GAAGGCGATG
CGCGACCGGC TCTTTCCGCC CACTGCGAGG AAAACGCTCC GGAGCTTCAC CTCCGGCGAG
GCGGCCAAGC TGATCGGCGT TTCCGATGGG TATTTGCGCC AGCTGTCTTT GGCTGGCGAA
GGGCCGCAGC CCGACACCGG TGCGGGCGGG CGCCGCTCCT ACTCGCTCTG CGACATCAAC
GCACTGCGCC GGCACCTCGC CGAACAGGCG GTTTCCAAGG GGAATGGCGC CAAGGCGCGG
GGCTACCTGA AATGGCGCGA TGCCTTAAGA AGCGAGCATC TGCAGGTCAT TTCGGTCACC
AATTTCAAGG GCGGCTCGGG CAAGACGACC TCGTCGGTTC ATCTCGCGCA GTATCTTGCC
CTCACCGGAC ACCGGGTGCT CGCGGTCGAC CTCGATCCTC AGGCGTCGCT CTCGGCGCTG
TTCGGTTATC AGCCGGAACT GGACCTGACG GGCAACGATA CGCTCTATGG CGCGATCCGT
TACGATGCCG AGGCCCGGCC GTTGAAGGAA ATCATCCGCA AGACATATTT CGACGGGCTC
GACCTGGTAC CGGGCAATCT CGAACTGCAG GAATTCGAGC ACACGACGCC TCAGGCCCTG
AGCGCGCGCC AGAGCGGCGC AGATGCCGGA CCGCTCTTCT TCGCCCGCGT GCAGGCGGCA
CTTGCAAGCG TCGCCGACGA TTACGATGTG GTTGTGATCG ACTGCCCGCC GCAACTTGGC
TACCTGACGC TCTCGGCGCT CTGCGCTTCG ACTTCGGTCA TCGTCACCGT GCATCCGCAG
ATGCTCGACG TCGCCTCGAT GAACCAGTTC CTCTACATGA CCTCGGACCT GCTCAGCGTG
GTGCGTGAGG CGGGCGGCGA GCTCAACTTC GACTTCCTGC GTTACCTGGT CACCCGCTTC
GAGCCGAATG ACGGACCACA GGCTCAGATC GTCGGCTTCA TGCGCTCGCT CTTCGGAGAG
CGGGTCCTGA CCTCGGCCAT GGTAAAGTCG ACCGCAATTT CGGACGCCGG TCTCACCAAG
CAGACGCTTT ACGAGGTCGG GAGGGAGAAT TTCACCCGCG CCACCTATGA TCGGGCGATC
GAGTCGCTGA ATGCGGTCAA CGGCGAGATC GAGGCTCTCA TTCATGCAGC ATGGGGGCGC
TAG
|
|---|
| Protein sequence | MNMKVSAAQT TAAGGAAFGR PADEAIAADA RALSEQLKAM RDRLFPPTAR KTLRSFTSGE
AAKLIGVSDG YLRQLSLAGE GPQPDTGAGG RRSYSLCDIN ALRRHLAEQA VSKGNGAKAR
GYLKWRDALR SEHLQVISVT NFKGGSGKTT SSVHLAQYLA LTGHRVLAVD LDPQASLSAL
FGYQPELDLT GNDTLYGAIR YDAEARPLKE IIRKTYFDGL DLVPGNLELQ EFEHTTPQAL
SARQSGADAG PLFFARVQAA LASVADDYDV VVIDCPPQLG YLTLSALCAS TSVIVTVHPQ
MLDVASMNQF LYMTSDLLSV VREAGGELNF DFLRYLVTRF EPNDGPQAQI VGFMRSLFGE
RVLTSAMVKS TAISDAGLTK QTLYEVGREN FTRATYDRAI ESLNAVNGEI EALIHAAWGR
|
|---|
| |