Gene Smed_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4182 
Symbol 
ID5319348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp661797 
End bp662261 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID640775987 
Productactivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_001312920 
Protein GI150376324 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0911379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAT CGTCTCTGAA GGAGGAGAAC GCTCTTACCA TTACGCGCGT CGTCAACGCG 
CCGCGTGATC TCGTCTTCAA GGTCTGGACC ACACAGGAAC ACCTTTCGCG TTGGTGGGGG
CCGAAAGACT TCACCGTTGC TGCGATGACG ACGGATTTCC GTAGGGGCGG CGCCTGGCGT
TGTTGCATCC GCGCGCCGGA GGGACAGGAC TACTGGGCGC ACGGCATCTA TCGCGAGATC
GAGCAGCCAA ATCGAATCGT CTTCAGTTTC GCCTGGGAAG AGGAAGGCGC CATCGACACG
CTGATTACGG TTACCTTCGA GGATGTGTCG GGTGGCACAG CTCTCACCTT CCATCAGACG
CCGTTCACGA GCGTCGAGAG CCGCGATTCG CACGCGGAGG GCTGGAGCGA GTGCATCGAT
CGGCTTGCCG ACTATGTCGC TGCCCGGAAG GAGGAAGTGC AATGA
 
Protein sequence
MNASSLKEEN ALTITRVVNA PRDLVFKVWT TQEHLSRWWG PKDFTVAAMT TDFRRGGAWR 
CCIRAPEGQD YWAHGIYREI EQPNRIVFSF AWEEEGAIDT LITVTFEDVS GGTALTFHQT
PFTSVESRDS HAEGWSECID RLADYVAARK EEVQ