| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4178 |
|---|
| Symbol | |
|---|
| ID | 5318587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 655239 |
|---|
| End bp | 656603 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640775983 |
|---|
| Product | C4-dicarboxylate transporter DctA |
|---|
| Protein accession | YP_001312916 |
|---|
| Protein GI | 150376320 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.174427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCGG ACTGGGCCTG TCACGTGGAG GACATCATGA TCATCGAACA TTCCGCTGAG
GTCCGCGGCA AGACGCCCCT TTATCGCCAT CTCTACGTCC AGGTGCTGGC GGCGATTGCC
GCGGGCATTC TGCTCGGCCA TTTCTATCCC GATATCGGGA CGCAGCTCAA ACCGCTCGGC
GACGCCTTCA TCAGGCTGGT CAAGATGATC ATTGCGCCGG TGATCTTCCT GACGGTGGCG
ACCGGTATTG CCGGGATGAC CGATCTGGCC AAGGTCGGCC GCGTCGCCGG CAAGGCCATG
ATCTACTTCC TGGCATTCTC CACTCTCGCG CTTCTCGTCG GCCTCGTCGT CGCCAATCTC
GTGCAGCCGG GCGCCGGCAT GCATATCGAT CCGGCTTCGC TGGATGCGAA GGCGGTCGCG
ACCTATGCCC AGAAAGCACA TGAGCAGTCG ATCACCGGTT TCCTGATGAA CATCATTCCG
ACGACGCTCG TCGGGGCCTT CGCCGAGGGG GACATTCTGC AGGTCCTGTT CATTTCGGTG
CTCTTCGGCA TCTCGCTGGC GATCGTCGGC AAGAAGGCCG AGCCCGTCGT CGATTTCCTG
CAGGCCCTGA CGCTTCCGAT CTTCCGATTG GTGGCTATCC TGATGAAGGC GGCCCCGATC
GGTGCTTTCG GCGCCATGGC CTTCACCATT GGCAAGTACG GCATCGCCTC GATCGCCAAC
CTCGCCATGC TGATCGGCAC CTTCTATCTG ACGTCGTTCC TCTTCGTCTT CGTCGTGCTC
GGCGCGGTGG CGCGCTATAA CGGCTTCTCG ATCCTCTCGC TCGTGCGCTA CATCAAGGAG
GAACTGCTGC TGGTGCTCGG GACATCCTCC TCGGAGGCGG CTCTTCCGGG CCTCATGAAC
AAGATGGAGA AGGCCGGCTG CAAACGCTCG GTCGTCGGTC TCGTCATTCC GACCGGCTAT
TCCTTCAACC TGGACGGCAC CAATATCTAC ATGACGCTTG CGGCCCTCTT CATCGCCCAG
GCGACCGATA CGCCGCTCTC ATACGGCGAC CAGATCCTGC TGCTCCTCGT CGCGATGCTG
AGTTCGAAGG GTGCAGCCGG CATCACCGGC GCGGGCTTCA TCACACTTGC CGCAACGCTC
TCGGTCGTTC CCTCCGTGCC GGTGGCCGGC ATGGCGCTGA TCCTCGGCAT CGACCGCTTC
ATGTCGGAGT GCCGGGCGCT CACCAACTTC GTCGGCAACG CGGTTGCGAC GATCGTGGTG
GCGAAGTGGG AAGGCGAGCT TGATCAGGCG CAGCTTTCCG CCGCGCTTGG CGGCGAAATG
CAGGTTGAAA CCATTCCTGC GGTCGTCGTT CAGCCCGCCG AGTAA
|
|---|
| Protein sequence | MLPDWACHVE DIMIIEHSAE VRGKTPLYRH LYVQVLAAIA AGILLGHFYP DIGTQLKPLG
DAFIRLVKMI IAPVIFLTVA TGIAGMTDLA KVGRVAGKAM IYFLAFSTLA LLVGLVVANL
VQPGAGMHID PASLDAKAVA TYAQKAHEQS ITGFLMNIIP TTLVGAFAEG DILQVLFISV
LFGISLAIVG KKAEPVVDFL QALTLPIFRL VAILMKAAPI GAFGAMAFTI GKYGIASIAN
LAMLIGTFYL TSFLFVFVVL GAVARYNGFS ILSLVRYIKE ELLLVLGTSS SEAALPGLMN
KMEKAGCKRS VVGLVIPTGY SFNLDGTNIY MTLAALFIAQ ATDTPLSYGD QILLLLVAML
SSKGAAGITG AGFITLAATL SVVPSVPVAG MALILGIDRF MSECRALTNF VGNAVATIVV
AKWEGELDQA QLSAALGGEM QVETIPAVVV QPAE
|
|---|
| |