| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4176 |
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| Symbol | |
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| ID | 5318585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 651820 |
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| End bp | 653178 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640775981 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001312914 |
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| Protein GI | 150376318 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.280959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCAG CTCCAACCGT GTTCCTGATC GATGACGACC GCGATCTTCG CAAGGCGATG
CAGCAGACAC TGGAGCTTGC AGGCTTCACC GTCTCGCCCT TTGCCAGCGC GGCGGAGGCG
CTCGGAGAAC TCACCGCCGA CTTCGCGGGC GTCGTCATCA GCGATATCCG CATGCCGGGG
ATGGACGGGC TTACGCTGTT CCGCAAGGTT CTGGCGCTGG ACCCGGATCT GCCCATGATC
CTTGTTACCG GGCACGGCGA CATACCGATG GCGGTGCAGG CGATCCAGGA CGGCGCCTAT
GATTTCATCG CCAAACCCTT TGCCGCCGAC CGGCTCGTTC AGAGCGCAAG GCGTGCCGAG
GAGAAACGGC GGCTCGTCAT GGAAATCCGT GCGCTTCGCC GCACGGCCGA AGCCGCCTCC
GAGGGCCTGC CGCTGATCGG TCAGACGCCG GCGATGGAGC GGCTGCGCCA GACCCTGAAG
CACATCGCCG ATACCGATGT CGACGTGCTG GTCGCCGGCG AGACGGGCAG TGGCAAGGAG
GTCGTGGCGA CGCTGCTGCA CCACTGGAGC CGGCGCAGGA GCGGCAATTT CGTTGCCCTC
AATTGCGGCG CTCTGCCGGA AACGGTGATC GAGAGCGAGC TCTTCGGCCA CGAGCCCGGG
GCGTTTACCG GCGCCGTCAA GAAGCGTATC GGCCGGATCG AGCATGCAAG CGGCGGCACG
CTCTTTCTCG ACGAAATCGA GGCTATGCCA CCGGCAACGC AGGTGAAGAT GCTGCGCGTG
CTCGAAGCCC GCGAGATCAC GCCGCTCGGC ACAAATCTGA CACGCCCGGT CGACATCCGC
GTCGTCGCCG CCGCCAAGGT CGATCTCGGC GACCCAGCCG AACGCGGCGA CTTCCGCGAG
GATCTCTTCT ACCGGCTGAA CGTGGTAACG CTCTCGATCC CACCCCTTCG CGAACGCCGC
GACGACATTC CGCTCCTCTT CTCCCATTTC CTCGCACGTG CCGCCGAGCG CTTCGGCCGC
GATGTGCCGG CGATCCCATC CGCGGTGCGC GATCACCTGG CAGCGCATTC CTGGCCGGGG
AACGTGCGCG AGCTTTCCCA TTTCGCCGAG CGGGTGGCCC TTGGGGTAGA GGGCACTCTG
GGCGCCGCCG CGGCCGCACC CGTTTCAGGC GGTGCGACGC TGCCGGAAAG GCTGGAACGC
TATGAAGCGA ATATCCTAAA GGAAGCGCTG ACAGCCCATC GCGGCGACGT CAGGGAAACG
CTGCGGGCCC TCGGCATCCC CCGTAAAACC TTTTACGACA AGCTGCAGCG CCACGGCATC
AACCGGACGG ACTATGTCAA AGAACGAGGC CCCGCCTGA
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| Protein sequence | MRAAPTVFLI DDDRDLRKAM QQTLELAGFT VSPFASAAEA LGELTADFAG VVISDIRMPG
MDGLTLFRKV LALDPDLPMI LVTGHGDIPM AVQAIQDGAY DFIAKPFAAD RLVQSARRAE
EKRRLVMEIR ALRRTAEAAS EGLPLIGQTP AMERLRQTLK HIADTDVDVL VAGETGSGKE
VVATLLHHWS RRRSGNFVAL NCGALPETVI ESELFGHEPG AFTGAVKKRI GRIEHASGGT
LFLDEIEAMP PATQVKMLRV LEAREITPLG TNLTRPVDIR VVAAAKVDLG DPAERGDFRE
DLFYRLNVVT LSIPPLRERR DDIPLLFSHF LARAAERFGR DVPAIPSAVR DHLAAHSWPG
NVRELSHFAE RVALGVEGTL GAAAAAPVSG GATLPERLER YEANILKEAL TAHRGDVRET
LRALGIPRKT FYDKLQRHGI NRTDYVKERG PA
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