| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4170 |
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| Symbol | thiE |
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| ID | 5318579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 644887 |
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| End bp | 645492 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775975 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001312908 |
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| Protein GI | 150376312 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.623908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.52609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAGCTCG ACCCCTTCTA TCTCATCGTC AACAGTGCCG CCTGGATCGA ACGCCTGGTA
CCGCTCGGCG TCAAGCTGGT GCAGCTCCGC GTCAAGGATC TCGGCGCGGA CGATATTCGC
AGTCAGATTC GCCTGGCCAA GGCGGTCTGC TCCGCCCATG CCTGCCAGCT CATCGTCAAC
GACTATTGGA GACTCGCGAT CGAGGAAGGT TGCGACTTCG TCCATCTGGG CCAGGAGGAC
CTGGCGGACG CCGATCTCGG CGCAATCCGC GCGGCCGGGC TCAAGCTGGG CCTCAGCACC
CATGATGAAG CGGAACTGGA AACGGCGCTC GCGGCCGGGC CCGACTATAT TGCGCTCGGG
CCGATCTACC CGACCATCCT CAAGAAAATG AAATGGGCGC CGCAGGGCCT GGAGCGGCTT
TCGACCTGGC GCGACCGGAT GGGCCGCCTG CCGCTTGTCG CGATCGGCGG CCTCAACCCC
GAGCGTATCG AAGGCGTTTT CGCCCATGGT GCCGACAGTG CCGCCGTGGT GACCGACATC
ACGCTGAACG CCGATCCGGA AGCACGGACG AGGGAGTGGA TCCAAAGAAC AGACAGGCGG
AGGTAA
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| Protein sequence | MKLDPFYLIV NSAAWIERLV PLGVKLVQLR VKDLGADDIR SQIRLAKAVC SAHACQLIVN
DYWRLAIEEG CDFVHLGQED LADADLGAIR AAGLKLGLST HDEAELETAL AAGPDYIALG
PIYPTILKKM KWAPQGLERL STWRDRMGRL PLVAIGGLNP ERIEGVFAHG ADSAAVVTDI
TLNADPEART REWIQRTDRR R
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