| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4169 |
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| Symbol | |
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| ID | 5319198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 643415 |
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| End bp | 644620 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775974 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001312907 |
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| Protein GI | 150376311 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.240515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.577442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA CAGCGACTAC CCTGGATGCC GCGCTCATAC CGGAAACCAA CGAGCGGATC
GATCCGGCCT GGTCCGGTGT CGGCTCACTT GCGCTCGGCG TGTTCGGCCT CGTAACCGCA
GAATTCCTCC CCGTCAGCAT CCTCACCCCG ATGGCGGCCG ATCTCGGCAT CAGCACCGGC
ACGGCCGGCC AGGCGGTCAC GGCTACCGCC GTCGTCGGCG CGGTCGCGGG ACTGACCGTT
GCCATCGCCA CGCGCCGGTT CGACCGCCGG CTCGTGCTTT GGGGGTTTAC TCTCGCGCTG
ATTGTTTCCA GTCTCATCGC AGCTTTTGCG ACCAACCTGG CAATGCTCCT TACCGCACGG
GTCATTCTTG GCGTTGGGCT CGGCGGCTTC TGGTCGATGA TGGCGGCAAT CGCCTTGCGT
CTCGTGCCGA TGTCTCTCGT GCCGCGCGCT ATGTCGATCG TCTTCACCGG GGTCTCGGTG
GCAACGGTCT GTGCCGCGCC GATCGGCGCT TACATCGGCG ATCTCTGGGG TTGGCGCGCC
GCATTTTTGA TGGCCGCGGC AGTCGGCGCC GTGACGCTGA TCGTGCAGAT GGTCAGCATA
CCCCGGCTGC CGCCGCAATC CGCCCCGAGT TTGAAGCTTC TGTTCGATCT CCTGGGCAGG
CCGAGCATCC GTATCGGGAT CATCACGGTT CTGCTATTCG TCTCGGGTCA CTTTGCCGGT
TTCACCTATG TGCGTCCGTT CCTGGAGAAA GTGCCGGAAT TCGGTATCGA GGCGATCTCG
CTGATCCTGC TCGCCTACGG CATAGGCGGC TTCTTCGGCA ACATCGCCGG CGGGCTCATC
ATCGAACGCA GCATCACGGC GGCCGTTGGT CTCGCAACGC TGCTTATCGC GGCCATGGCA
TTTCTCCTTG TGACCTTCGG TTCGCTGGAT GTCGTTTCGG CCACGGCGGT AACCATCTGG
GGCTTTGCCT TCGGAGCCTT GCCGGTCGCC GTCCAGACCT GGATGGTGCG CGCCGCTCCC
GAACATGCGG AAAGCACAGG CGGCCTCATC GTCGCGACAT TCCAGGTCGG CATCGCCAGC
GGCGCCGTGC TCGGCGGGCT CTTCGTGGAC GCTTTCGGCC CGCTCGGCGC CATCACCTAC
TGCGCCGCCG CGACATTTGC CAGCGCGCTT TATGTCGCGA CTTCCCGGCG GAGCATCGGT
GTTTGA
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| Protein sequence | MTDTATTLDA ALIPETNERI DPAWSGVGSL ALGVFGLVTA EFLPVSILTP MAADLGISTG
TAGQAVTATA VVGAVAGLTV AIATRRFDRR LVLWGFTLAL IVSSLIAAFA TNLAMLLTAR
VILGVGLGGF WSMMAAIALR LVPMSLVPRA MSIVFTGVSV ATVCAAPIGA YIGDLWGWRA
AFLMAAAVGA VTLIVQMVSI PRLPPQSAPS LKLLFDLLGR PSIRIGIITV LLFVSGHFAG
FTYVRPFLEK VPEFGIEAIS LILLAYGIGG FFGNIAGGLI IERSITAAVG LATLLIAAMA
FLLVTFGSLD VVSATAVTIW GFAFGALPVA VQTWMVRAAP EHAESTGGLI VATFQVGIAS
GAVLGGLFVD AFGPLGAITY CAAATFASAL YVATSRRSIG V
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