Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4153 |
Symbol | |
ID | 5319202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 626056 |
End bp | 626559 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640775958 |
Product | thioesterase superfamily protein |
Protein accession | YP_001312891 |
Protein GI | 150376295 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.104889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGG ATCAGGAGAC GCGACATCTG GTGATGACCG TTCTGATGAC GCCGGACATG GCGAATTTCA GCGGCAAGGT GCATGGCGGT GCGCTTTTGA ATCTGCTTGA CCGTGTGGCC TTCTCCTGCG CGTCACGCTT TTCCAAGCAA TATGCGGTCA CCCTCTCCGT CGACCAGGTG ATCTTCAAGG AGCCGATCCT TGTCGGCGAA CTCGTCACTT TCCGCGCGGC GGTCAATTTT GCCGGGCGGA CGTCTATGGA GGTCGGCATA AGGGTCGAGG CGGAAAACAT CCGTGCCGGC ACCCGACGGC ACACCAATTC CTGCTATTTC ACCATGGTCG CCGTCGATGA AGCGGGCCGC CCGGTGGCGG TGCCGGAGTA CCGTCCGGAG ACGGCAACCG AGAAACGCCG CCACCAAGCG GCCGAACTGC GGCGCACGCT GCGCCGCGAA TTTGCTCATC GGCTGAAGAC CGTCGCGGAA ACCGGCCGTG ATGTGGTGGA TTAG
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Protein sequence | MMTDQETRHL VMTVLMTPDM ANFSGKVHGG ALLNLLDRVA FSCASRFSKQ YAVTLSVDQV IFKEPILVGE LVTFRAAVNF AGRTSMEVGI RVEAENIRAG TRRHTNSCYF TMVAVDEAGR PVAVPEYRPE TATEKRRHQA AELRRTLRRE FAHRLKTVAE TGRDVVD
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