Gene Smed_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4153 
Symbol 
ID5319202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp626056 
End bp626559 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content62% 
IMG OID640775958 
Productthioesterase superfamily protein 
Protein accessionYP_001312891 
Protein GI150376295 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.104889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGG ATCAGGAGAC GCGACATCTG GTGATGACCG TTCTGATGAC GCCGGACATG 
GCGAATTTCA GCGGCAAGGT GCATGGCGGT GCGCTTTTGA ATCTGCTTGA CCGTGTGGCC
TTCTCCTGCG CGTCACGCTT TTCCAAGCAA TATGCGGTCA CCCTCTCCGT CGACCAGGTG
ATCTTCAAGG AGCCGATCCT TGTCGGCGAA CTCGTCACTT TCCGCGCGGC GGTCAATTTT
GCCGGGCGGA CGTCTATGGA GGTCGGCATA AGGGTCGAGG CGGAAAACAT CCGTGCCGGC
ACCCGACGGC ACACCAATTC CTGCTATTTC ACCATGGTCG CCGTCGATGA AGCGGGCCGC
CCGGTGGCGG TGCCGGAGTA CCGTCCGGAG ACGGCAACCG AGAAACGCCG CCACCAAGCG
GCCGAACTGC GGCGCACGCT GCGCCGCGAA TTTGCTCATC GGCTGAAGAC CGTCGCGGAA
ACCGGCCGTG ATGTGGTGGA TTAG
 
Protein sequence
MMTDQETRHL VMTVLMTPDM ANFSGKVHGG ALLNLLDRVA FSCASRFSKQ YAVTLSVDQV 
IFKEPILVGE LVTFRAAVNF AGRTSMEVGI RVEAENIRAG TRRHTNSCYF TMVAVDEAGR
PVAVPEYRPE TATEKRRHQA AELRRTLRRE FAHRLKTVAE TGRDVVD