Gene Smed_4150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4150 
Symbol 
ID5319199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp622336 
End bp622860 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content62% 
IMG OID640775955 
Productphenylacetate-CoA oxygenase, PaaJ subunit 
Protein accessionYP_001312888 
Protein GI150376292 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.963466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAACGG CGCTACGCCC TTCGATCGAA GATGTCTGGA ACTGGCTTTC GCACGTGCCG 
GATCCCGAAA TTCCGGTCAT CTCGGTGACG GATCTCGGCA TCATCCGCGA CGTCGCCTGG
GATCGCGAGG CGCTGGTGGT GACGGTGACG CCCACCTATT CTGGCTGTCC CGCAACTGCG
GTCATCAATC AAGACATCGA GCGGGCGTTG AAGGAGAAAG GCATCGAGAA TGTCAGGCTC
GAGCGCCGGC TCTCACCCGC CTGGACTACC GACTGGATCA GTGCCGAGGG CCGCGAGAAG
CTTGGAAACT ACGGCATCGC GGCCCCTATA GACGGCACCA CCGCCGAAGG CAGGCTCATG
GAAAGGATCG CAGGCCTCGC CGGTGGCGCG CCCCTGACGG TCCAATGTCC GCGCTGCAAT
TCCGGGCGGA CCGAGAAGAT CAGCCAGTTC GGCTCGACGC CTTGCAAGGC GAGCTATCGC
TGTCGCGACT GTTTGGAACC TTTCGACTAT TTCAAGTGCA TCTGA
 
Protein sequence
MATALRPSIE DVWNWLSHVP DPEIPVISVT DLGIIRDVAW DREALVVTVT PTYSGCPATA 
VINQDIERAL KEKGIENVRL ERRLSPAWTT DWISAEGREK LGNYGIAAPI DGTTAEGRLM
ERIAGLAGGA PLTVQCPRCN SGRTEKISQF GSTPCKASYR CRDCLEPFDY FKCI