| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4144 |
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| Symbol | |
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| ID | 5319140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 616757 |
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| End bp | 618130 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775949 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001312882 |
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| Protein GI | 150376286 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.663959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGAC AACCCAGGAT CACTTTCATC GGCGCCGGTT CCACCGTGTT CATGAAGAAC
ATTATCGGCG ATATCTTGCA GCGCCCGGCG CTTTCGGCCG CGACCATCGC CTTGATGGAC
GTCAACCCGG AGCGCCTGGC GGAAAGCGAG ATCGTCGCGG GCAAGCTGGC GCGCACGCTG
GGCGCCGGCG CCAGGATCGA GACGCACTCC GACCAGCGCA AGGCGCTCAC GGGAGCGGAC
TTCGTCGTGG TTGCCTTCCA GATCGGCGGC TACGAGCCAT GCACCGTGAC AGATTTCGAG
GTGCCGAAAA AATACGGACT GCGCCAGACG ATCGCCGACA CGCTCGGCGT CGGCGGCATC
ATGCGGGGGT TGCGCACCGT CCCGCATCTC TGGAAGATCT GCGAGGACAT GCTCGAGGTC
TGCCCCGAGG CGATCCTCCT GCAATATGTA AACCCGATGG CGATCAACAC CTGGGCGATC
GCCGAGAGGT ATCCGGCCAT CAAGCAGGTG GGCCTCTGCC ACTCCGTGCA GGGCACGGCC
TATGAACTCG CCCGCGATCT CGAGATACCG CTCGAGGAGA TCCGCTATCG CGCCGCCGGC
ATCAACCACA TGGCCTTCTA TCTGAAATTC GAGCACCGTC AGAAGGACGG CAGCTATCGT
GATCTCTATC CGGACCTTAT CCGCGGCTAC CGCGAGGGGC GCTTTCCGAA GCCGAGCCAT
TGGAACCCGC GCTGCCCAAA CAAGGTACGT TACGAAATGC TGACGCGGCT CGGCTATTTC
GTCACCGAAA GCTCGGAGCA TTTCGCCGAG TACACGCCCT ATTTCATCAA GGAGGGGCGT
CCCGATCTGA TCGAAAAATT CGGGATTCCG CTCGACGAGT ATCCGAAGCG TTGCATCGAG
CAGATCGAGC GCTGGAAGGG CCAGGCGGCC GCCTTCAAGG AGGCGGAGAC GATGGAAGTC
GCAGAGAGCC GCGAATATGC CTCCTCGATC ATGAACTCGG TCTGGACCGG CGAGCCCTCG
GTGATTTACG GCAACCTCAG AAACAATGGC TGCATCACCT CGCTGCCGGA AAACTGCGCG
GCGGAGATGC CGTGTCTCGT CGATCAGTCG GGTATTCAGC CGACCCATAT CGGCGCGCTG
CCGCCGCAAC TCACGGCGTT GATCCGCACC AACATCAACG TACAGGAGTT GACGGTTCAG
GCGCTCGTCA CTGAAAACCG GGAGCATCTC TACCATGCGG CAATGATGGA TCCGCATACC
GCCGCCGAGC TCGACCTCGA CCAGATCTGG TCCCTTGTCG ACGATCTGCT CACAGCGCAC
CGCGACTGGA TCCCGGAATG GGCCCGCGTC GCGCAGAAGG TAGCGGCCGC CTGA
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| Protein sequence | MTRQPRITFI GAGSTVFMKN IIGDILQRPA LSAATIALMD VNPERLAESE IVAGKLARTL
GAGARIETHS DQRKALTGAD FVVVAFQIGG YEPCTVTDFE VPKKYGLRQT IADTLGVGGI
MRGLRTVPHL WKICEDMLEV CPEAILLQYV NPMAINTWAI AERYPAIKQV GLCHSVQGTA
YELARDLEIP LEEIRYRAAG INHMAFYLKF EHRQKDGSYR DLYPDLIRGY REGRFPKPSH
WNPRCPNKVR YEMLTRLGYF VTESSEHFAE YTPYFIKEGR PDLIEKFGIP LDEYPKRCIE
QIERWKGQAA AFKEAETMEV AESREYASSI MNSVWTGEPS VIYGNLRNNG CITSLPENCA
AEMPCLVDQS GIQPTHIGAL PPQLTALIRT NINVQELTVQ ALVTENREHL YHAAMMDPHT
AAELDLDQIW SLVDDLLTAH RDWIPEWARV AQKVAAA
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