| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4143 |
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| Symbol | |
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| ID | 5319139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 615053 |
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| End bp | 616723 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775948 |
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| Product | ABC transporter related |
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| Protein accession | YP_001312881 |
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| Protein GI | 150376285 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.538724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACGA TCGAAAGCAT TGTCCCGGCA CCGGAAGAAC GGCGTGACCG CCACACGAAG
GAAGCGAGAC CGGTCATCGA CGCCCGCCGG GTCGCCGTGA GCTTCAAGGT CGAAAACGGT
GCGGTCGAGG CGGTGAAGGA CGTCTCCTTC CAGCTCTATC GCGGAGAGAC CGTGGCGATT
GTCGGCGAAT CCGGTTCCGG CAAGTCGGTG ACGGCGCGCA CCGTCATGGG ACTCTTGTCG
AAACGCGCTA CGATCGCGCC GCAAGCGCGG ATCGAATATG ATGGCAAGGA CGTGCTGAAA
TTTTCGAAGA GAGAACGCCG GGCGTTGCGC GGCGATCGCA TTTCAATGAT CTTTCAGGAG
CCGATGAGCT CGTTGAACCC GGTCTATACG ATCGGCAGTC AGATCGTCGA GGCGATCCGC
GCCCATCGGC GCGTCGGCCG CCGCGCTGCT GCGGAGCGGG CGCTGGAGCT CTTGCGCCAC
GTGCAGATCC CGGACCCGGA AGCGCGCCTG AACCAATACC CGCATCAGCT TTCCGGCGGT
CAGCGCCAGC GTGTGATGAT TGCCATGGCA CTTGCCAACG ATCCGGACGT GCTGATCGCC
GACGAGCCGA CGACGGCGCT CGACGTCACC GTGCAGGCGC AGATTCTCAA TCTCATCCGC
AAGCTGCAGC AGGAACTCGG CATGGCGGTG ATTTTGATCA CCCATGACCT GACGGTGGTT
CGCCAGTTTT CCGATTATGT CTATGTCATG CAGCTTGGAG AGGTGAAGGA ACACAACACG
ACGGAAGCGC TCTTTGTCGA TCCGCAGCAC GCTTATACGC GCCGGCTGCT TGCCTCAGAG
CCGTCCGGCT CCGCCAATCC GCTGCCCGCC GACGCGCCGA TCATGCTCGA CGGCAGAAAC
GTCCGCGTCT CCTTCACCTT GAAGAAGGGC GGGTTTTTCA GGCCGGAATA CAAGGAGCTC
ATCGCGGTGG ACGGCCTCAG CCTCAATCTG CGTCGGCACG AGACGCTCGG GCTGGTCGGA
GAGTCCGGTT CCGGCAAAAC CACCTTCGGT CAGGCGCTGA TCCGGTTGAT CAACACCGAT
GGCGGCGAAG TCTATTTCGA GGGCGAACCG ATCCACGACA AAAACCGCAA GGCGATGCGG
CCGCTTCGCT CGAAGATCCA GATCGTCTTT CAGGATCCTT TTTCCTCACT CAACCCCCGT
ATGTCGGTCG GCCAGATCAT CGAGGAAGGG CTGATCGTCA ACGGCATTGG CGAAAGCCGC
AAAGACAGGC TGAAGCGCGT CGAGGACGCG CTCGTCAGCG CCGGCATGCC CGCCAATATC
CTGTCGCGCT TCCCGCACGA GTTCTCCGGC GGCCAGCGCC AGCGCATCGC GATCGCGCGC
GCCATCGCGC TCGAGCCGGA ATTCATTCTG CTCGACGAGC CGACCTCGGC GCTCGACCTG
TCGGTGCAGG CGCAGATCAT CGAGCTCCTG CGCCGGCTGC AGGACGAGCG GGGCCTGAGC
TACCTCTTCA TCTCCCATGA CCTGAAAGTT GTGCGGGCGC TCTGCCACCG CGTGGCGGTC
ATGCAGAACG GCAAGATCGT CGAAGAGGGG CCCGTAAGCG AAATTCTCAA CAGACCCAAG
ACTGCCTACA CGGAGCGGCT GGTAAAGGCC GCCTTCGAAG TGGCTGCGTG A
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| Protein sequence | MATIESIVPA PEERRDRHTK EARPVIDARR VAVSFKVENG AVEAVKDVSF QLYRGETVAI
VGESGSGKSV TARTVMGLLS KRATIAPQAR IEYDGKDVLK FSKRERRALR GDRISMIFQE
PMSSLNPVYT IGSQIVEAIR AHRRVGRRAA AERALELLRH VQIPDPEARL NQYPHQLSGG
QRQRVMIAMA LANDPDVLIA DEPTTALDVT VQAQILNLIR KLQQELGMAV ILITHDLTVV
RQFSDYVYVM QLGEVKEHNT TEALFVDPQH AYTRRLLASE PSGSANPLPA DAPIMLDGRN
VRVSFTLKKG GFFRPEYKEL IAVDGLSLNL RRHETLGLVG ESGSGKTTFG QALIRLINTD
GGEVYFEGEP IHDKNRKAMR PLRSKIQIVF QDPFSSLNPR MSVGQIIEEG LIVNGIGESR
KDRLKRVEDA LVSAGMPANI LSRFPHEFSG GQRQRIAIAR AIALEPEFIL LDEPTSALDL
SVQAQIIELL RRLQDERGLS YLFISHDLKV VRALCHRVAV MQNGKIVEEG PVSEILNRPK
TAYTERLVKA AFEVAA
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