| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4142 |
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| Symbol | |
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| ID | 5319138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 613914 |
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| End bp | 615041 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640775947 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001312880 |
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| Protein GI | 150376284 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.697509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG AAGTAGGAAG TACGCTTCCG CTGGCCGTCG AACCCGAGGA AAAGCACCAC
CACGAGAGCT ACTCCGCACT CGTATGGCGC CGATTGAAGC GCTCCTGGAC CGGCCTGCTC
GGCCTGATCC TCGTCTGCCT GCTGATCCTG ATGGCCGTCT TTGCCGATTT CCTGTCGCCG
GTGGATCCGA AGGTGACGGA TGTCGCCTTC GCGCAGCCCC AGACGATCAG TTTCCGCGAC
AAGGACGGCA ATTTCGTCTT TCCGCCGCGG AGCTATCCGG TGCGGGAGAC GGAGGAACTC
GATCCGATCA CCTTCCAGCC GATCATCGGC CCCGACTACG AAAATCCACA GGTGCTGGGC
TTCTTCGTCA AGGGCGCTCC GTACCGGCTC TTCGGGTTGA TCCCGGCCGA GCGCCATCTC
TTCGGCGCAG TCGACGGAAC GCCGGTGCAT CTGCTCGGCA CCGACAAATT CGGCCGGGAC
GTACTGTCCC GCATTCTCTA CGGCTCGCGC ATCTCGCTGA TGATTGCGCT CACCGTTGTC
TTCATCGTCA CAGTGGTCGG CACGACGGTC GGCATGGTTT CCGGCTATTT CGGCGGTCGC
TTCGACGCCT GGGTGCAGCG CTTCGTCGAA CTCGTGCTCG CCTTTCCGCA ATTGCCGCTC
TATCTGGCGC TCGCCTCGCT GATTCCGGTT ACAGCGCCGA CCAACGTCTT CCTCGCCTTC
GTCATCATCG TAATGTCGGC GCTCGGCTGG GCGCAGATGT CGCGCGAGGT GCGCGGCAAG
ACCCTGGCGC TTGCCCGGAT CGAATATGTG CGGGCGGCGA TCGCCATCGG CGCGACGGAT
CGGCGCATCA TCTTCCAGCA CATCTTCCCG AATGTGATGA GCCACGTCAT CGTCGCCGTG
ACGCTCGCCA TTCCGCAGGT GGTGCTGCTT GAATCCTTCC TCGGCTTCCT CGGCTTTGCG
GTCAAGCCGC CGCTGATCTC CTGGGGGCTG ATGTTGCAGG ACACGGCCAA TTATTCGGCG
ATCGGTTCCT ATCCCTGGAT CCTCTCGCCT GTCGCCTTCG TGCTCGTCAC CGTCTTTGCC
TTCAACGCGT TGGGCGACGG CTTGCGCGAC GCAATCGACC CCTATTGA
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| Protein sequence | MTIEVGSTLP LAVEPEEKHH HESYSALVWR RLKRSWTGLL GLILVCLLIL MAVFADFLSP
VDPKVTDVAF AQPQTISFRD KDGNFVFPPR SYPVRETEEL DPITFQPIIG PDYENPQVLG
FFVKGAPYRL FGLIPAERHL FGAVDGTPVH LLGTDKFGRD VLSRILYGSR ISLMIALTVV
FIVTVVGTTV GMVSGYFGGR FDAWVQRFVE LVLAFPQLPL YLALASLIPV TAPTNVFLAF
VIIVMSALGW AQMSREVRGK TLALARIEYV RAAIAIGATD RRIIFQHIFP NVMSHVIVAV
TLAIPQVVLL ESFLGFLGFA VKPPLISWGL MLQDTANYSA IGSYPWILSP VAFVLVTVFA
FNALGDGLRD AIDPY
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