| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4140 |
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| Symbol | |
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| ID | 5319136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 610706 |
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| End bp | 612787 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640775945 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001312878 |
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| Protein GI | 150376282 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0860796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC ATCGATCGAA TAGAACGGCG TACCTGCTGA TCGGCATATC CGCATTTGCC
GTGCAGGCCT TCGCATCAGA GCCTACGATC GTGCCCGAAC AGCCGCCATT CCCGGCGCAG
GGCAAAATCA CCTATGTATC CCGCGAATCC ATTCTCGAGT TCAAGGCGCT GCCCGAGTAC
AGGGAGCCCG AATGGGTCAC GGAGAAATTC GTCAAGGCCG GCAAGCTGCC GCCGCTATCC
GAGCGCCTGC CGAAAGAACC GATGGTCTTC AAAGCAGGCA ACATGCCGGA CGGAATGGGC
GTCTATGGCG ATGTTATGCG CCATGTGATC GGCGGCCGGC CGGAAGGCTG GAACTACAGT
GCCGGCCAGA CCCAGGGATG GGGCGGCATC GACATTGGAA TGTTCGAGTG CCTGACCCGC
ACCGCACCGC TTTTCCAGGT TGAGGCGGAC GACATGGAGC CGCTGCCGAA CCTGGCGAAG
AGCTGGGAAT GGTCCGAGGA CGGCCACAAG CTCACCATGC ATCTGATCGA GGGCGCGAAA
TGGTCGGACG GCGATCCCTT CGACGCCGAA GACGTCATGT TCTATTGGGA GGACAATGTC
CTCGATCCGA GCGTTTCGCC ATTGAACGGC GCGACGCCCG AGACCTTCGG CGAGGGAACG
ACGCTGAAAG AGGTCGATAA ATACACGGTC GAATGGACCT TCAAGGAGGC CTTCCCGCGT
CAGCATCTTT TCGCAATGGC CTATGGCACC TTCTGCCCCG GCCCGTCGCA CATCCTCAAG
ACCAAGCACC CGAAATATGC AGGCACGACC TATAACGAAT ACAAGAACGG CTTCCCGGCC
GAATATCTGA ATCTGCCGGT GATGGGCGGA TGGGTACCGG TCGCCTACCG CCCGGATGAT
ATCATCGTGC TGCGCCGCAA CCCCTATTAC TGGAAGGTCG ACGAGGCCGG AAACCAGCTG
CCCTACCTCA ATGAGCTTCA CTACAAGCTC TCGACCTGGG CCGACCGAGA CGTGCAGGCA
ATCGCCGGAT CGGGGGACTT CTCGAATCTG GAGCAGCCGG AAAACTTCGT TGAATCGCTG
AAGCGAGCCG CCAATGAGAG CGCGCCGGCA CGGCTTGCCT TCGGTCCGCG CGTCATCGGC
TACAACATGC ACATGAACTT CTCCGGCAAT GGTTGGGGAG ATCCCGATGA ACGCGCCAAG
GAGGTGCGTG AGCTGAATCG CAGCCTCGAC TTCCGCAAGG CGGTCACCAT GGCGGTCGAC
CGCAAGAAGC TGGGGGAAGC GCTGGTAAAA GGTCCCTTCA CGGCGATCTA TCCGGGCGGG
CTTTCCTCCG GTACGAGCTT CTACGACCGG AACTCCACCA TGTACTACCC CCACGATCTC
GAAGGTGCGA AGGCCCTTCT TGAAAAGGTT GGACTGAAGG ACACCGACGG CAACGGCTTC
GTCAATTTTC CGGCCGACAA ACTTGGCGGC CGCGACGTCG AAATCGTGTT GCTCGTCAAT
TCCGACTACA GCACCGACCG AAATCTTGCC GAAGGCATCG TCGGACAGAT GGAAAAGCTC
GGGCTCCGGA TCGTTCTGAA TGCGCTCGAC GGCAAGCAGC GGGACGCGGC AAATTATGCG
GGCCGCTTCG ATTGGATGAT TCATAGAAAC ACGGCGGAAT TCGCTTCCGT TGTGCAGAAC
ACGCCTCAGC TCGCCCCGAC CGGCCCGCGC ACCAGCTGGC ATCACCGCGC TCCGGAAGGC
GGCGAGGTCG ACGCCTTGCC CCACGAGACG GAGCTCGTCG ACATCGTCAA CAAGTTCATC
GCCAGCAACG ACAATGACGA GCGCGCAGAG CTGATGAAGC AGTACCAGAA GGTGGCGACC
ACGAATGTCG ATACCGTCGG CCTGACGGAA TATCCGGGCG CGCTGATCAT CAACAAGCGC
TTCTCGAACA TTCCTCCGGG CGCGCCGATC TTCATGTTCA ACTGGGCGGA AGACACGATC
ATCCGCGAAA GGGTCTTCGT TGCCGCCGAC AAGCAGGGCG ATTTTGAGCT CTATCCCGAG
CAGCTTCCCG GCAAGCCCGG CGAAAGCGGC CCGATCAACT GA
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| Protein sequence | MKTHRSNRTA YLLIGISAFA VQAFASEPTI VPEQPPFPAQ GKITYVSRES ILEFKALPEY
REPEWVTEKF VKAGKLPPLS ERLPKEPMVF KAGNMPDGMG VYGDVMRHVI GGRPEGWNYS
AGQTQGWGGI DIGMFECLTR TAPLFQVEAD DMEPLPNLAK SWEWSEDGHK LTMHLIEGAK
WSDGDPFDAE DVMFYWEDNV LDPSVSPLNG ATPETFGEGT TLKEVDKYTV EWTFKEAFPR
QHLFAMAYGT FCPGPSHILK TKHPKYAGTT YNEYKNGFPA EYLNLPVMGG WVPVAYRPDD
IIVLRRNPYY WKVDEAGNQL PYLNELHYKL STWADRDVQA IAGSGDFSNL EQPENFVESL
KRAANESAPA RLAFGPRVIG YNMHMNFSGN GWGDPDERAK EVRELNRSLD FRKAVTMAVD
RKKLGEALVK GPFTAIYPGG LSSGTSFYDR NSTMYYPHDL EGAKALLEKV GLKDTDGNGF
VNFPADKLGG RDVEIVLLVN SDYSTDRNLA EGIVGQMEKL GLRIVLNALD GKQRDAANYA
GRFDWMIHRN TAEFASVVQN TPQLAPTGPR TSWHHRAPEG GEVDALPHET ELVDIVNKFI
ASNDNDERAE LMKQYQKVAT TNVDTVGLTE YPGALIINKR FSNIPPGAPI FMFNWAEDTI
IRERVFVAAD KQGDFELYPE QLPGKPGESG PIN
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