| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4139 |
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| Symbol | |
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| ID | 5319281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 609032 |
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| End bp | 610504 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775944 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001312877 |
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| Protein GI | 150376281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCT TCAAGATCGC CATTATCGGC GCCGGCAGCA TCGGCTTCAC CAAGAAGCTC
TTCACGGACA TTCTTTCCGT GCCGGAGCTT CGCGACGTCG AGTTTGCCCT GACGGATCTG
AGCGAGCACA ACCTCGCGAT GATCAAGTCT ATCCTCGACC GGATTGTGGA GGCCAACAAA
CTCCCCACCC GGGTGACGGC AACCACCGAC CGCCGCAGGG CACTTGAGGG CGCGCGCTAT
ATCATCAGCT GCGTGCGTGT CGGCGGCCTC GAAGCCTATG CCGACGATAT CCGGATACCG
TTGAAATATG GCGTCGATCA ATGCGTCGGC GACACGATCT GTGCTGGCGG CATTCTTTAT
GGCCAGCGCA ACATTCCGGT GATCCTCGAT TTCTGCAAGG ACATCCGCGA GGTGGCAGAG
CCCGGCGCGA AGTTCCTGAA CTATGCCAAT CCGATGGCGA TGAACAGCTG GGCGGCGATC
GAATACGGCA AGGTCGACAC GGTCGGGCTC TGCCATGGCG TCCAGCACGG AGCCGAGCAG
ATCGCGGAGA TTCTCGGCGC CGGGGAGGGT GAGCTCGACT ACATCTGCTC CGGCATCAAC
CACCAGACCT GGTTCGTGGA TATTCGCCTT GGCGGCCGCA AAATCGGCAA GGACGAACTC
GTCGCCGCCT TCGAAGCGCA TCCGATTTTC TCGCAGCAGG AGAAGCTCCG CATCGACGTG
TTGAAGCGTT TCGGCGTCTA TTCAACCGAA AGCAACGGCC ATCTTTCGGA ATACCTCCCC
TGGTACCGCA AGCGTCCCGA CGAGATTTCG AGATGGATCG ACATGTCGGA TTGGATCCAC
GGCGAGACCG GCGGATATCT CCGCTATTCG ACCGAGACCC GCAACTGGTT CGAAACGGAA
TACCCGCGCT TCCTCGAAGA GGCGAGCCGG CCGCTGGAGA CGATCAAGCG CTCGAACGAA
CATGCAAGCC GCATTCTGGA AGCACTCGAG ACGGGACGCG TCTATCGCGG CCACTTCAAT
GTCAAGAACA ACGGCGTAAT CACCAACCTC CCGGCGGATG CGATAATCGA GTCTCCGGGC
TTCGTCGACC GCTTCGGCAT CAATATGGTG GCGGGCATCA CCTTGCCGGA GGCCTGCGCG
GCCACCTGCA TTGCCTCGAT CAACGTCCAG CGCATGTCGG TTCATGCGGC AATCACGGGC
GACATCGATC TCCTGAAGCT CGCCGTTCTG CACGACCCGC TGGTCGGCGC TATCTGCACG
CCGGAGGAGG TCTGGCAAAT GGTGGATGAA ATGGTCGTCG CCCAGGCCGA ATGGCTGCCG
CAATATGCCC ATGCGATCGA CGCGGCCAAG GAAAGGCTCG CCCGCGCCAC CGTCGCTACG
CGGGAGTGGA AGGGTGCAGC GCGCCGCGAG GTGCGCTCGA TCGAGGAAAT CCGCGCGGAA
AAGGAAGCGG CGAAGCTGCG TGCCGCCGGG TAG
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| Protein sequence | MASFKIAIIG AGSIGFTKKL FTDILSVPEL RDVEFALTDL SEHNLAMIKS ILDRIVEANK
LPTRVTATTD RRRALEGARY IISCVRVGGL EAYADDIRIP LKYGVDQCVG DTICAGGILY
GQRNIPVILD FCKDIREVAE PGAKFLNYAN PMAMNSWAAI EYGKVDTVGL CHGVQHGAEQ
IAEILGAGEG ELDYICSGIN HQTWFVDIRL GGRKIGKDEL VAAFEAHPIF SQQEKLRIDV
LKRFGVYSTE SNGHLSEYLP WYRKRPDEIS RWIDMSDWIH GETGGYLRYS TETRNWFETE
YPRFLEEASR PLETIKRSNE HASRILEALE TGRVYRGHFN VKNNGVITNL PADAIIESPG
FVDRFGINMV AGITLPEACA ATCIASINVQ RMSVHAAITG DIDLLKLAVL HDPLVGAICT
PEEVWQMVDE MVVAQAEWLP QYAHAIDAAK ERLARATVAT REWKGAARRE VRSIEEIRAE
KEAAKLRAAG
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