| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4134 |
|---|
| Symbol | |
|---|
| ID | 5319276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 603450 |
|---|
| End bp | 604265 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640775939 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001312872 |
|---|
| Protein GI | 150376276 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAA TTGGACGCTT CGCGGCAAGC GCCGCCACCT ATGGCTTTCT CGGCCTGATG
GCCTTTCTGT CCATCTTCCC CTTTATCTGG ATGGTGCTGG GAGCAACCAA TTCGTCGATC
GATATCATCA AGGGAAAGCT CCTGCCGGGC GCAGCCTTTG CAACCAATGT CGGCAATTTC
TTCACGCTGA ACGTACCGCT CGTCTTCTGG AATTCCGCAA AGATCGCCAT CCTTGCAACC
GTGCTCACGC TCGCGGTCTC CTCGCTTGCC GGCTACGGCT TCGAGATGTT CCGCTCGCGA
GGCCGCGAGC GCGTCTATCG GGCGATGCTG CTCACGCTGA TGATCCCCTT CGCTGCGCTG
ATGATCCCGC TCTTCGTCAT CATGGGCAAG GCGGGTCTCA TCAACACGCA TATCGCCGTC
GTCCTGCCCT CGATCGGTTC GGCCTTCGTC ATTTTCTATT TCCGGCAGAG CACCAAGGCC
TTCCCGTCGG AACTGCGCGA CGCGGCAAAG GTGGACGGGC TTAAGGAATG GCAAATTTTC
CTCTTCATCT ACGTGCCGGT CATGCGATCG ACCTATGCGG CTGCCTTCGT CATCGTCTTC
ATGACCGCCT GGAACAACTA TCTCTGGCCA CTGATCGTGC TCCAGACGAA CGAGACAAAG
ACGATCACGC TGGTCATTTC CTCACTCGCC TCCGCCTACT ACCCCGATTA CGGCGTCGTC
ATGGTTGGCA CGATCCTCGC AACGCTGCCG ACGCTTGCCG TCTTCTTCTT CATGCAACGC
CAGTTCGTCC AGGGCATGCT GGGCTCAGTC AAATAG
|
|---|
| Protein sequence | MNGIGRFAAS AATYGFLGLM AFLSIFPFIW MVLGATNSSI DIIKGKLLPG AAFATNVGNF
FTLNVPLVFW NSAKIAILAT VLTLAVSSLA GYGFEMFRSR GRERVYRAML LTLMIPFAAL
MIPLFVIMGK AGLINTHIAV VLPSIGSAFV IFYFRQSTKA FPSELRDAAK VDGLKEWQIF
LFIYVPVMRS TYAAAFVIVF MTAWNNYLWP LIVLQTNETK TITLVISSLA SAYYPDYGVV
MVGTILATLP TLAVFFFMQR QFVQGMLGSV K
|
|---|
| |