Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4132 |
Symbol | |
ID | 5319274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 600107 |
End bp | 601180 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640775937 |
Product | ABC transporter related |
Protein accession | YP_001312870 |
Protein GI | 150376274 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.751697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATC TCCAACTCAG CCAGGTTCGT AAATCCTATG GTGGCCTGGA GGTCATCAAG GGCGTCGATC TCGACATAAA ATCCGGCGAG TTCGTCGTCT TCGTCGGGCC GTCCGGCTGC GGCAAGTCGA CCCTTCTGCG GATGATCGCA GGCCTTGAGG AGATCACTTC GGGCGAGCTT TCGATCGATG AGGTCAGGAT GAACGACGTC GATCCGTCCA AACGCGGTAT CGCCATGGTG TTCCAGTCCT ATGCGCTCTA TCCGCACATG ACGGTCCGCG AGAATATGGG CTTCGCGCTC CGCTTCGCCG GCGTCCCCAA GGCCGAAATC GAGAAGCGGG TGAACGAAGC CGCCGATATC CTCGAACTCG GGACGCTGCT CGACCGCAAG CCTAAGCAGC TTTCCGGCGG CCAGCGCCAG CGCGTGGCGA TCGGCCGGGC GATCGTCCGC CATCCGAAGA TCTTTCTCTT CGACGAGCCG CTTTCGAACC TGGATGCGGA ACTGCGCGTG CACATGCGCA TCGAGATCGC GCGACTGCAC AAGCAGCTCG CCACCACCAT CGTCTACGTG ACGCACGATC AGGTCGAGGC CATGACGCTC GCCGACAAGA TCGTCGTCAT GCGCGGCGGC GTGGTCGAGC AGATCGGCTC GCCCCTGAAT CTCTATGATG ATCCGGCCAA CCTCTTCGTC GCCGGCTTCA TTGGCTCGCC AAAGATGAAT TTCCTGAAGG GAACGACCGA GATCGTCGAA GGCCGGACTT ATGCGCGCCT GCCGGACCAC GGAGGCTTGA AAATTCCGAT AAGCCTCGAA GCGATAGCCC CGGATACTCC GGTGACGATC GGCCTTCGGC CCGAGCACTT CAATGAAGCC GGACCGGCTG TGCTCGATCT CACCATCGAC ATGCTGGAGC ATCTCGGCGG CGAGACCTTT GCCTATGCCC GCCATGGCAA TGGCGCGTTG ATCGTCGTCG AAACGAAGAA CGGCCGCGGA CTAAAGGCCG GCGACCGCCT CGCTGCCCGT TTCGATCCGG CCTCGGCGCT GGTGTTCGAT GGAGAGGGAA AACGGCTGCG GTAG
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Protein sequence | MSNLQLSQVR KSYGGLEVIK GVDLDIKSGE FVVFVGPSGC GKSTLLRMIA GLEEITSGEL SIDEVRMNDV DPSKRGIAMV FQSYALYPHM TVRENMGFAL RFAGVPKAEI EKRVNEAADI LELGTLLDRK PKQLSGGQRQ RVAIGRAIVR HPKIFLFDEP LSNLDAELRV HMRIEIARLH KQLATTIVYV THDQVEAMTL ADKIVVMRGG VVEQIGSPLN LYDDPANLFV AGFIGSPKMN FLKGTTEIVE GRTYARLPDH GGLKIPISLE AIAPDTPVTI GLRPEHFNEA GPAVLDLTID MLEHLGGETF AYARHGNGAL IVVETKNGRG LKAGDRLAAR FDPASALVFD GEGKRLR
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