| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4117 |
|---|
| Symbol | |
|---|
| ID | 5318552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | + |
|---|
| Start bp | 583514 |
|---|
| End bp | 584758 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640775924 |
|---|
| Product | oxidoreductase domain-containing protein |
|---|
| Protein accession | YP_001312857 |
|---|
| Protein GI | 150376261 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACAT TACCGAAACA GACCTTGCGT ATCGGCTTCG TCGGCACGGG TTTCATTGCG
CATTTTCACC TGAATTCGCT CATCGGCGTG CGCAATGTCG AGGTGACCGG CGTCTACAGC
CGCAGTGCCG CAAACCGCGA GCGCTTCGTG GGCGAAGCCG AGGCGCTTGA TCTCGGCAGG
TGTCGCGCGC ATGACAGCCT TGAATCGCTG TTCTCTGCCG CCGACATCGA CGCGATCTGG
ATTCTCTCGC CGAACTACAC GCGGCTCGAC GTCATGCGGA CACTCCACCG CGAGATAAAG
GCGGGACGCA GCACGATTTT CGCTGTCGCC TGCGAGAAGC CGCTGGCGCG CACCGTGGCG
GAGGCCCGGG AAATGCTGCA CCTGGCTGAG GATGCCGGGC TCAACCACGG CTATCTCGAA
AACCAGGTGT TCTGCACGCC GGTGCTACGC GGCAAGGAGA TCATATGGCG CCGCGCTGCC
TCCACAACCG GCCGGCCCTA TCTCGCGCGC GCCGCGGAAG AGCATGCAGG CCCGCACGAG
CCCTGGTTCT GGCAGGGCGA CAAGCAGGGC GGCGGAGTGC TTTCCGACAT GATGTGCCAC
AGCGTCGAGG TAGCGCGCCA TCTGCTCACC GCGCCCGGCG CACCGCGCAA TTCGCTGAAG
GTCAAGTCGG TGAACGGCAC GGTTGCGAAC CTCAAATGGA CGCGTGCCGG CTATGCCGAT
CAGTTGCGCC GGCGCTTCGG CGAGGATGTC GACTACCGCC GGCGCCCGTC AGAGGATTTC
GCCCGGGCGA CCGTGACGCT TGAGGACGAG GAGGGCAATG AACTGATGAT CGAGGCGACG
ACCTCCTGGG CCTATGTGGG CGCCGGCCTG CGCATTCAGC TCGAGCTTCT CGGGCCGGAA
TACGCACTGG AATACAACTC GCTCGGCACC GGGTTGAAAA TCTTCCTGTC TCGGGCCGTA
CAAGGCTCCG AGGGCGAGGA CCTGGTGGAA AAGCAGAATG CCGAGCAGGG CCTTATGCCG
GTGCTGGAGG ACGAGGCCGG GGTCTACGGC TATACGGACG AAAACCGCCA CATGGTCGAA
AGCTTCCGCA AGGGCGTGAA GCCGATCGAA ACCTTTGACG ACGGCCTCGC AGTTGTCGAG
ATCCTTATGG GCCTCTACCG GTCTGCCGAG ATTGGTGCGA CGCTCCATTT TCCCGCGCCG
GAGCTCGAAA ACTATGTTCC GGTCGTGGCG CGCGTGGGAG CGTGA
|
|---|
| Protein sequence | MSTLPKQTLR IGFVGTGFIA HFHLNSLIGV RNVEVTGVYS RSAANRERFV GEAEALDLGR
CRAHDSLESL FSAADIDAIW ILSPNYTRLD VMRTLHREIK AGRSTIFAVA CEKPLARTVA
EAREMLHLAE DAGLNHGYLE NQVFCTPVLR GKEIIWRRAA STTGRPYLAR AAEEHAGPHE
PWFWQGDKQG GGVLSDMMCH SVEVARHLLT APGAPRNSLK VKSVNGTVAN LKWTRAGYAD
QLRRRFGEDV DYRRRPSEDF ARATVTLEDE EGNELMIEAT TSWAYVGAGL RIQLELLGPE
YALEYNSLGT GLKIFLSRAV QGSEGEDLVE KQNAEQGLMP VLEDEAGVYG YTDENRHMVE
SFRKGVKPIE TFDDGLAVVE ILMGLYRSAE IGATLHFPAP ELENYVPVVA RVGA
|
|---|
| |