| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4115 |
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| Symbol | |
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| ID | 5318550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 581500 |
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| End bp | 582456 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775922 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001312855 |
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| Protein GI | 150376259 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTA TCAATTCGTT TCTCCGCCAG CCGATCGTCG TCGCGCTCGT CCTGATCGTG
TTCCTCCTCT ATCTCGGAGA AGCGCTGTCG CCTGGCTTTG CCACCGGAGG GCAGATATTG
CGGCTGCTGA TCGTCGCCTC GCTGCTCGGC ATCATCGCGG CCGGCCAGAA TGTCGTGATC
CTCGGCGGAC GCGAAGGCAT CGATCTGTCG GTCGGCGGCG TCGTCTCGCT CTCGGCGATC
ATTGCCGGCA ATGTCATGAA CGGCGCCGAT GGCGGCATCC TGCCGGCTGT TGGCGCCTGC
CTGGCAGCGG GCGCGTTCTT CGGACTCCTG AACGGGCTCG GTGTCACGCT TCTCAGAATC
CCGCCGCTCG TGATGACGCT TGGGATGCTT GGCGTGCTGC AGGGGCTTCT CGTGGTCATC
CGGATGGGCA TTCCCTCCGG CCAGGCCGCG CCCGCCCTCT CGCGCTTCGT CACGCAGCCG
TTCGCCTACG GAATCCCCGG CATTATCTGG CTCTGGATCA TGATCGGCAT CGTCATGGCG
CTCATGCTCA ACCGCACCGT CTTCGGCCAT CGCATCTATG CGATCGGCTC GAATGAGCAC
GCCGCCTATA TGGCCGGCGT GCCGGTCGGC ATCATCCGCA TTGCTCTCTT TGTGATATCC
GGCATGTTCG CCGCGATTGC CGGGCTCTGC CTGCTAGGCT ATTCCGGCAC ATCCTTCGCC
AATGTGGGCG AACAGTACAT GCTCCCCTCG ATCATTGCGG TCGTCTTCGG CGGAACGTCG
CTTGCCGGCG GCAAGGGTGG CTATACCGGC ACCATGGCCG GCGCCGTTCT GCTGGTTATC
CTGCAAAGCA TCCTCACGAC GATCAATATC GAGGAGTCGG GACGGCAGAT GGTGTTCGGT
GCGACGCTGC TCCTTCTCAT GATGTTCTAC GGGCGCGGCC GTGCGATGCG CGCATGA
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| Protein sequence | MSRINSFLRQ PIVVALVLIV FLLYLGEALS PGFATGGQIL RLLIVASLLG IIAAGQNVVI
LGGREGIDLS VGGVVSLSAI IAGNVMNGAD GGILPAVGAC LAAGAFFGLL NGLGVTLLRI
PPLVMTLGML GVLQGLLVVI RMGIPSGQAA PALSRFVTQP FAYGIPGIIW LWIMIGIVMA
LMLNRTVFGH RIYAIGSNEH AAYMAGVPVG IIRIALFVIS GMFAAIAGLC LLGYSGTSFA
NVGEQYMLPS IIAVVFGGTS LAGGKGGYTG TMAGAVLLVI LQSILTTINI EESGRQMVFG
ATLLLLMMFY GRGRAMRA
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