Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4111 |
Symbol | |
ID | 5318546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 576499 |
End bp | 577659 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775918 |
Product | dihydrolipoyllysine-residue succinyltransferase |
Protein accession | YP_001312851 |
Protein GI | 150376255 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGACC TCATCGACAT TCAGGCTCCT TTGGAGCAGG AGGGGACGAA AGCGGTTGTT CGCAACTGGC TCAGGGAAAT CGGCGAAAAG GTCAAATCGG GCGACCCGCT GGTCGAGCTT GAAACGGATA AGGTGACCCA GGAGGTGGCG GCTCCTGCCG ACGGGGTGCT TCTCGAGATC CTGATGCGGA ACGGCGACGA TGCCAGGCCC GGCGCCGTTC TCGGCCGGAT CGGCAGCGAG CTTGCCGGAG GCGAAGATGC GCCGCATTAT TCCCCCGCCG TGCGACGGGC AGCGGAAGAA TATGGCTTCG ATCCTGCGAC CATCACCGGC ACCGGCCGGG ATGGCCGTGT TACGCGCGGC GACATGGACA GGGCGTTCGC GGCGCGGCAG GCGGGCGGAG CATCGCCCGA GCCCCGGCCC GACGGCGGGA GAGGGGAGCC CGAATCCAGC CGGATACCGC ATAGCAGCAT GCGCGCCGCA ATCGCCGAAC ATATGCTCAA CTCCGTAATG ACGGCGCCGC ATGTGACGGC CGTATTCGAG GCAGATTTCT CGGCGGTGAC GCGTCATCGG GACGAACACA GGAAGAAGCT TGCGGCACGG GGCGTCAATC TTTCCTACAC TGCCTATGTT GTTCTGGCCT CGCTGGCGGC GATGCGCGCG GTTCCCGAGG TGAACAGCCG CTGGCACGAG GATGCGCTCG AAACATTCGA TGACATCAAT ATCGGCGTTG GGATTTCCCT TGGTGGAAAG GGACTGGTCG TCCCTGTAAT CCGCCGCGCG CAGAATCTGT CGCTGGCGGA GATTGCGGCC CGAATTCAGG ACCTGACGAC GCGCGCGCGT TCCAACGCGC TCTCCCCCGC AGACGTGACG GGCGGCACGT TCACCATTTC CAATCACGGA GTCTCCGGAT CCCTGCTCGC GACGCCGATC ATCATCAACC AGCCGCAATC GGCAATCCTC GGTGTCGGGA AACTCGACAA GCGGGTGGTC GTTCGCGAGG TGGACGGCAT CGATACGATT CAGATCCGGC CGATGGCCTA TGTGTCGCTG ACGATTGACC ATCGGGCACT GGACGGCCAC CACACGAATG CGTGGCTAAC GGAATTCGTC CGTGTCCTCG AGAGCTGGCC GGGTGAAGCA ACGAAGAACG GCTTGGCCTG A
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Protein sequence | MVDLIDIQAP LEQEGTKAVV RNWLREIGEK VKSGDPLVEL ETDKVTQEVA APADGVLLEI LMRNGDDARP GAVLGRIGSE LAGGEDAPHY SPAVRRAAEE YGFDPATITG TGRDGRVTRG DMDRAFAARQ AGGASPEPRP DGGRGEPESS RIPHSSMRAA IAEHMLNSVM TAPHVTAVFE ADFSAVTRHR DEHRKKLAAR GVNLSYTAYV VLASLAAMRA VPEVNSRWHE DALETFDDIN IGVGISLGGK GLVVPVIRRA QNLSLAEIAA RIQDLTTRAR SNALSPADVT GGTFTISNHG VSGSLLATPI IINQPQSAIL GVGKLDKRVV VREVDGIDTI QIRPMAYVSL TIDHRALDGH HTNAWLTEFV RVLESWPGEA TKNGLA
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