| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4107 |
|---|
| Symbol | |
|---|
| ID | 5318996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 572611 |
|---|
| End bp | 573177 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640775914 |
|---|
| Product | dienelactone hydrolase |
|---|
| Protein accession | YP_001312847 |
|---|
| Protein GI | 150376251 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAG TGATCCTCTT CCATTCCGTA TACGGGCTGC GCCCGTTCGA ACGGGCTGTC
GCCGAGCGGT TGGCAGTCGC AGGGCACGAG GTCTTCACGC CCGACCTCTA TGAAGGCCGG
GTTGCCTCTT CGATTGACGA GGGCTTTGCC ATCAAGGAAG AAATCGGTTG GCGCGCTCTT
TGCGAGCGCG CCGAGCGGGC GGTCGCCGGG CTGCCTGCCG ATGCCGTTCT CGGCGGCTTT
TCGATGGGCG CTGCGGTCGC TGCCAGCCTT TGGCCGAAGC GACCTGAGAC AGCCGGCGTT
CTCTTCCTGC ACAGCATCGC CGAAATTCCG GCAAATGCAC GCCCTGGAGT GCCGGTGCAG
GTCCATCTCG CCGATCCGGA TGTCTTCGAG CCGGCAGATG AGGTCACCGC CTGGCGCAGC
GCCGCCGAAA CGACGCCGAT CGATCTTGAG GTTTTCACCT ACGCCGGCGC CGGACACCTT
TATACCGACG CCACGCTTCC GGACTACGAT TCCGAAGCCG CTCACCTCAC CTGGAGCCGC
GTCGAACGTT GCCTCGCCGC GCTTTGA
|
|---|
| Protein sequence | MATVILFHSV YGLRPFERAV AERLAVAGHE VFTPDLYEGR VASSIDEGFA IKEEIGWRAL
CERAERAVAG LPADAVLGGF SMGAAVAASL WPKRPETAGV LFLHSIAEIP ANARPGVPVQ
VHLADPDVFE PADEVTAWRS AAETTPIDLE VFTYAGAGHL YTDATLPDYD SEAAHLTWSR
VERCLAAL
|
|---|
| |