| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4106 |
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| Symbol | |
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| ID | 5318995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 568942 |
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| End bp | 572580 |
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| Gene Length | 3639 bp |
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| Protein Length | 1212 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640775913 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001312846 |
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| Protein GI | 150376250 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit
[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.264245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGA CGGGAACTTG GGATTTCTGG GTGGATCGCG GCGGCACCTT CACCGACGTC
ATCGGCCGCG ATCCGTCGGG CGCCCTGCGC GCATTGAAGG TTCTTTCGGA AAACCCCGGT
GCCTATCGCG ATGCGGCGGT CCACGGCATC CGGCTGCATC TCGGCCTTGG CTCCGGCGAG
CCGGTGCCGC ACGGCCTCAT CGGCGAGGTC AGGATGGGCA CCACCGTGGC CACCAATGCG
CTGCTGGAGC GCAAGGGCGA GCGGCTTGGG CTCGTCACGA CGCGCGGGTT CCGCGATGCG
CTCCGGATCG GCTATCAGGA ACGCAAGAAG ATTTTCGCGA CCGAGATCAT CAAGCCGGAG
GCACTCTATT CTGGTGTCGT GGAGCTTGAC GAACGAGTGC TTGCGGATGG CACGGTTGAG
CTGCCGCTGG ACGAGGCGGC GGCGCGGCGG GCGCTCGAAA GCTTGAAGGC GGATGGTTAC
GGTGCCGTCG CCATCGTCCT GCTGCACGCT TACAAATATC CCGCTCACGA GATGACGGTC
GCCCACCTCG CGCGCTCGAT CGGGTTCGAG CAGGTATCTG TCAGTCACGA GGTCTCGCCG
CTCGTCAAAT ATGTCGGCCG CGGCGATACG ACGGTGATCG ATGCCTATCT TTCGCCCGTG
CTCGGCCGGT ACGTGGCACA GGTTTCGCAA GAACTCGACG TGGGCCGCTC CGGCGCCCGC
GTCATGTTCA TGATGTCGTC CGGCGGACTG ACGGCGGCGG AGATGTTCCA GGGCAAGGAC
GCAATCCTTT CCGGGCCGGC GGGCGGCGTC GTCGGCCTTG CGCGCACGGG CGAGGCGGCC
GGCTTCGACC GCGTCATCGG CTTCGACATG GGCGGAACGT CGACGGACGT CGCCCATTTT
GACGGGGAGT ACGAGCGCGC CTTCGAGACC GAGGTTGCCG GTGTGCGGGT GCGCGCGCCG
ATGATGCTGA TCCACACGGT TGCTGCCGGC GGAGGCTCGA TCCTCCATTT CGACGGGGGT
CGCTTCCGCG TGGGCCCGGA TTCGGCCGGC GCCAATCCAG GCCCCGCCTG CTACCGCAAC
GGCGGACCGC TCGCCGTCAC CGACGCAAAT GTCATGCTGG GCAAGTTGCT GCCCGAGCAT
TTTCCGGCGA TCTTCGGACC GGAGCAGAAC CAGCCCCTCG ACGTCGAGAC GGTGCGCGAG
CGTTTCGCGG CCCTTGCGGC CGAGATCGGC GACGGGCGCA GCCCCGAAGA TGTCGCTGAC
GGTTTCATCC GCATTGCGGT TGCGAACATG GTCGAGGCGA TCAAGAAGAT TTCGGTGAGC
CGCGGCTATG ACGTGACGCG TTATGCGCTC AACTGCTTTG GCGGTGCCGG CGGGCAGCAC
GCCTGCCTCG TGGCCGATGC GCTCGGCATG AAGAGCATAC TCCTGCATCC GATGTCTGGT
CTTCTTTCGG CTTACGGCAT GGGCCTCGCC GATATCAGAG CCACGCGGCA GAAAGCACTG
GGCGTCGCGC TGGACGAGGC GGCACCGCAC GCGATTCTGG AGCTCGGTCA CAAACTGCAA
TCGGAATGCC TGGTTGAACT GGAGGCGCAG GGGATCGCCC TGGAGCGGAT CCGCACGCAT
TTGCGCGCCC ATATTCGCTA TGCCGGCACC GATACGGTTC TGCCGGTCGA AGCGGCCTTT
CCCGATCAGG ACGACCAGGC GCGGCTCCGC CGTGACTTCG AGCATTTACA CAAGCGCCGC
TTCGGTTTCA TCGCCGAGAA CAAGGCTCTG ATGATCGATG CCGTCGAAGT CGAAACGGTG
GGTGGCGGGG CTGCAGAAAT GGAGGCGGAG GGCCTTGCCG CCACGGCCGG TGAGCTTGTT
CCCGACCAGC GAATCCGTTT CTATTCGCAA GGCATGTTTC ACGACGCGCC GGTGGCGCTG
CGTTCGCAAG TCCAGCCCGG CCAGAAACTC GCCGGTCCTG CGATCATTAT CGAGCCCAAC
CAGACGATCG TGGTCGAAGA CGGCTGGCAG GCGGAGTTGA CGACGAAGGA CCACATCGTG
CTGAGACGCG TCAAGGCGCT GCCCGAGCGT ACCGCGATAG GCACGAAGGC AGATCCGGTC
ATGCTGGAAA TCTTCAACAA CCTCTTCATG TCCATCGCCG AGCAGATGGG CGTGACGCTG
CAGAACACGG CTTATTCCGT CAACATCAAG GAGCGGCTCG ATTTCTCCTG TGCTGTCTTC
GACAGCGGGG GCAGTCTGGT CGCCAATGCG CCGCACATGC CGGTACATCT GGGCTCCATG
GATGCCTCGG TTGCGACTGC CATCCGCGAA AACCCGGTGA TCCATCCGGG CGACGTGTTC
CTGATCAATG CACCCTACAA TGGCGGCACG CATCTTCCTG ACCTGACGGT TTGCACGCCG
GTCTTCGACG ATGCGGGCCG CGAGATCCGC TTCTGGGTCG CAAGCCGGGG CCATCATGCG
GATATCGGAG GTATCTCGCC GGGCTCCATG TCGCCGCTCG CCACCGATAT CGAAGAGGAG
GGCGTCTATA TCGACAATTT CAGGCTCATC GACCGCGGCC GATTCTGCGA GGAGGGACTC
GAGAAGCTCC TGACCGGCGC GCGTTACCCG GTGCGCAATC TCCTTCAGAA CGTCAACGAT
CTCAAAGCCC AGGTCGCGGC CAACGAGAAG GGTGTCGCGG AACTCAAAAA GATGATCGCG
CAGTTCGGCG AGGACGTGGT CGAGGCCTAT ATGGGCCACG TTCAGGACAA TGCGGCCGAA
AGCGTGCGCC GCGTGATCGA TCAGTTGCCG GATGGCGAAT TCTGCTACGA GATGGACCAG
GGTTGCCGCA TCGTCGTGAA AATCTCCATC GATCGGGGGA GCCGCGAAGC AACGGTCGAT
TTCACCGGAA CGTCGGAGCA GCGCGCCGAC AATTTCAATG CGCCGGAGCC GGTGACGCGC
GCCGCCGTGC TCTATGTCTT TCGGGTGCTG GTAGAGGCCG ACATCCCGAT GAATGCCGGC
TGCCTGAGGC CCATCCGCAT CGTCATCCCG GACGGCACCA TGCTTTCGCC ACGCTACCCG
GCGGCGGTCG TCGCCGGCAA TGTCGAGGTC AGCCAGGCGG TCACCAATTG TCTCTTCGGT
GCGGTCGGGG CGCAGGCAGC CGCGCAGGGA ACGATGAACA ATCTGACGTT CGGCAATGCC
GAGTACCAAT ATTACGAGAC GATATGCTCC GGCGCGCCGG CCGGTCCCGG CTATGACGGC
GCCGATGCGG TCCACACCCA TATGACCAAT TCACGTCTGA CCGACCCGGA GATTCTCGAG
ACGCGCTTCC CGGTAGTTCT TGAAGATTTT CACATCCGCA AGGATTCCGG CGGGTGCGGC
AAGTGGTCGG CCGGCGATGG CACCGAGCGA ACGATCCGGG CGCGCCAGCG GCTCGACTTC
GCGATCCTTT CCGGCCATCG GCGTGTCCGG CCCTTCGGGC TGAAGGGCGG AGAGCCGGGC
GAACCGGGCC GCAACTATGT TCGCCGCAAT GACGGTCGCA TCGAAGAACT GCCTGGCTCG
GCTCATACGG TGCTCGAAGC GGGCGAGGCC TTTACAGTGG TGACGCCGAC GGGCGGCGGC
TATGGGAAGG ATGAGGGGCC GGAGGAAGGG CAGTTCTAG
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| Protein sequence | MSLTGTWDFW VDRGGTFTDV IGRDPSGALR ALKVLSENPG AYRDAAVHGI RLHLGLGSGE
PVPHGLIGEV RMGTTVATNA LLERKGERLG LVTTRGFRDA LRIGYQERKK IFATEIIKPE
ALYSGVVELD ERVLADGTVE LPLDEAAARR ALESLKADGY GAVAIVLLHA YKYPAHEMTV
AHLARSIGFE QVSVSHEVSP LVKYVGRGDT TVIDAYLSPV LGRYVAQVSQ ELDVGRSGAR
VMFMMSSGGL TAAEMFQGKD AILSGPAGGV VGLARTGEAA GFDRVIGFDM GGTSTDVAHF
DGEYERAFET EVAGVRVRAP MMLIHTVAAG GGSILHFDGG RFRVGPDSAG ANPGPACYRN
GGPLAVTDAN VMLGKLLPEH FPAIFGPEQN QPLDVETVRE RFAALAAEIG DGRSPEDVAD
GFIRIAVANM VEAIKKISVS RGYDVTRYAL NCFGGAGGQH ACLVADALGM KSILLHPMSG
LLSAYGMGLA DIRATRQKAL GVALDEAAPH AILELGHKLQ SECLVELEAQ GIALERIRTH
LRAHIRYAGT DTVLPVEAAF PDQDDQARLR RDFEHLHKRR FGFIAENKAL MIDAVEVETV
GGGAAEMEAE GLAATAGELV PDQRIRFYSQ GMFHDAPVAL RSQVQPGQKL AGPAIIIEPN
QTIVVEDGWQ AELTTKDHIV LRRVKALPER TAIGTKADPV MLEIFNNLFM SIAEQMGVTL
QNTAYSVNIK ERLDFSCAVF DSGGSLVANA PHMPVHLGSM DASVATAIRE NPVIHPGDVF
LINAPYNGGT HLPDLTVCTP VFDDAGREIR FWVASRGHHA DIGGISPGSM SPLATDIEEE
GVYIDNFRLI DRGRFCEEGL EKLLTGARYP VRNLLQNVND LKAQVAANEK GVAELKKMIA
QFGEDVVEAY MGHVQDNAAE SVRRVIDQLP DGEFCYEMDQ GCRIVVKISI DRGSREATVD
FTGTSEQRAD NFNAPEPVTR AAVLYVFRVL VEADIPMNAG CLRPIRIVIP DGTMLSPRYP
AAVVAGNVEV SQAVTNCLFG AVGAQAAAQG TMNNLTFGNA EYQYYETICS GAPAGPGYDG
ADAVHTHMTN SRLTDPEILE TRFPVVLEDF HIRKDSGGCG KWSAGDGTER TIRARQRLDF
AILSGHRRVR PFGLKGGEPG EPGRNYVRRN DGRIEELPGS AHTVLEAGEA FTVVTPTGGG
YGKDEGPEEG QF
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