Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4102 |
Symbol | |
ID | 5318991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 564366 |
End bp | 565871 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640775909 |
Product | hypothetical protein |
Protein accession | YP_001312842 |
Protein GI | 150376246 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.574512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCT TCAGCAATCT TGCCCTCGGC TTCGCGACCG CCGGCTCACC GGCGAACCTT TTCTTCTGCC TGATCGGCGT ACTCCTCGGG ACCCTGATCG GCGTGCTGCC CGGGATCGGA GCCACGGCGA CCATCGCGAT GCTGCTGCCG ATCACCTTCC AGCTTGAACC GGTCTCATCG TTGATCATGC TCGCCGGGAT TTATTACGGC GCCCAATATG GCGGCTCGAC GACCGCTATC CTGATCAACA TGCCCGGGGA GTCGTCTTCC GCCGTGACCG CCATTGACGG CTACCAGATG GCGCGCAAGG GCCGCGCCGG CGCGGCGCTG GCGATTGCGG CGCTCGGTTC GTTCTTCGCC GGTACCGTCT CGACATTCCT CGTCGCGCTC TTCGCGCCGC CGCTGACCGA GATCGCGCTC GAATTCGGCG CGGCTGAATA TTTCTCGCTG ATGATCGTCG GCCTCGTTTC CTCGATCGCG CTTGCGCACG GATCGGTTGT CAAGGCGCTT GCCATGGTGG CCCTCGGTCT TCTTCTCGGC CTTGTTGGAA CCGACATCTA CACCGGCACG CCGCGCTTCA CCCTGGGCAT CCGCGAATAT TCCGACGGAC TCAATTTCGT GGCGCTGGCG GTCGGCGTCT TCGGTATCGC CGAAATCCTC CGCAATCTGG AAAGCGAGAA AACGCGCGAA GTGCTTATGG CCAAGGTAAC CGACTTGATG CCGACGCGGG AAGACTTCAG GCAGATGGTC GCACCGGTGC TGCGCGGCAC CGCGATCGGC TCGGCGCTCG GCGTGCTCCC GGGGGGCGGC GCCATTCTCG CCGCCTTCGC GTCCTACACG GTGGAAAAGC GCCTCTCCGA CCGTCCGGAG GAATTCGGCC GCGGCGCAGT CGCCGGCGTC GCCGGACCGG AAAGCGCCAA TAATGCCGGT GCGCAGACCT CGTTCATTCC GCTGCTCACC CTCGGCATTC CGGCAAACCC CGTCATGGCG CTGATGATCG GTGCAATGAT CATCCAGGGC ATCGTTCCGG GACCGAACGT CGCGACGGAG CAACCCGCGC TCTTCTGGGG CATCATCGCC TCGATGTGGA TCGGCAATCT GATGCTGGTG GTCCTCAACC TACCGCTGAT CGGCCTTTGG GTGAAGCTCC TGACAATCCC TTATTTCGTG CTCTTCCCAA TCATCATGGC CTTCTGTTCG ATCGGCGTCT ACAGCGTCAA TTCCAACGTT TACGACCTCT ACGCCGTCGC CTTCTTCGGC CTTGTGGGCT ACCTGCTGCT CAAGCTGCGC TGCGAGCCGG CGCCGCTCCT CCTCGGCTTT GTTCTCGGAC CGCTGCTCGA GGAAAACCTC AGGCGCGCCA TGATCCTTTC GCGCGGCGAC GCGTCCACCT TCGTCACCCG GCCGATCAGC GCAACCCTAC TCCTCCTTGC CGCCGCCGTG CTCGTCATTG TCTTCCTGCC GAGCGTCAAG AAGAAGCGCG AACAGGTCTT CGTCGAGGAG GATTGA
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Protein sequence | MELFSNLALG FATAGSPANL FFCLIGVLLG TLIGVLPGIG ATATIAMLLP ITFQLEPVSS LIMLAGIYYG AQYGGSTTAI LINMPGESSS AVTAIDGYQM ARKGRAGAAL AIAALGSFFA GTVSTFLVAL FAPPLTEIAL EFGAAEYFSL MIVGLVSSIA LAHGSVVKAL AMVALGLLLG LVGTDIYTGT PRFTLGIREY SDGLNFVALA VGVFGIAEIL RNLESEKTRE VLMAKVTDLM PTREDFRQMV APVLRGTAIG SALGVLPGGG AILAAFASYT VEKRLSDRPE EFGRGAVAGV AGPESANNAG AQTSFIPLLT LGIPANPVMA LMIGAMIIQG IVPGPNVATE QPALFWGIIA SMWIGNLMLV VLNLPLIGLW VKLLTIPYFV LFPIIMAFCS IGVYSVNSNV YDLYAVAFFG LVGYLLLKLR CEPAPLLLGF VLGPLLEENL RRAMILSRGD ASTFVTRPIS ATLLLLAAAV LVIVFLPSVK KKREQVFVEE D
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