| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4096 |
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| Symbol | |
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| ID | 5318911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 558595 |
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| End bp | 560019 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640775903 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001312836 |
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| Protein GI | 150376240 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGAG AGCCGGTACA GATGCAGCGG AATGCGGCGA GTTCGCTGGG CGAGAGCCTC
ATTGCCAAGG TCATGGGTAC GGTGCAGCAG CGGATTGCGG CACGGAGTTT GACGCCGGGT
TCCCGGCTCC CTTCCATTCG CTCTTTCGCC TTGTCGATGA AAGTCTCAAA GTCCACCGTC
GTCGAGGCCT ATGAACGCCT TCAGGCCGAA GGCCTGATTC GTTCGCGGCC GGGCTCCGGT
TTTTACGTAG CGGCGCCGTT AGCGCCGCTG ACGCTCGCCG AGATCGGTCC GCCTGTCGAC
CGGGCCGTCG ATCCCTTATG GATCTCGCGC CAGGCGCTGG AGCCGGGGGA GGGCGTGCTC
CGGCCCGGCT GCGGTTGGCT GTCGCCGTCC TGGATGCCGG AGGAAGGATT GCGACGCGCC
TTGCGCGGCA TTGCCCGCGG GAGCAGCGCG ACGCTCGTTG ATTATGGTGC TCCGCTTGGA
TTGCAGCCCT TGCGCCAGCT TCTGGCACGG CGCGTGGCGC AGCACGGCAT CGAGGCATCG
CCGGACCAGA TATTGCTCAC CGAATCCGGC ACGCAGGCAA TCGATTTGCT TTGCCGCTTC
CTGCTGAAGC CCGGAGATGC GGTGCTCGTA GACGACCCCT GCTATTTCAA TTTTCACGCA
CTCCTCAGGG CGCATCAGGC AAGAATCGTC GGCGTTCCAT ACACGCCCAG CGGACCGGAT
ATAGGCCGCT TCGCCGAAGC GCTCACTGAG CACAAGCCGC GACTTTACAT TACCAATTCA
GCCCTTCACA ATCCGACCGG CGCAACCCTG TCGCCGCTCG TCGGCCATCG CCTGCTCAAG
CTCGCCGAAC AATCCGGGTT GACGATCATC GAGGATGATA TCTTCGCCGA TTTTGAAGAA
GCGCCCGCGC CGCGTCTTGC GGCCTTCGAC GGCCTCGAAC GGGTGGTGCA CATCGGCAGC
TTCTCGAAAA CGCTCTCGGC GGCCGTTCGG TGCGGTTTCA TCGTGGCGCC TCGTGATTGG
GTGGAGGCCT TGACCGACCT GAAGATCGCG ACGTGCTTCG GTGCAGCCGG GTTCTCTTCG
GAATTGGTGA TGGCGCTCTT GAAGGACGGC AGCTATCGCA AACATCTTGA GGCGGTGCGC
CAGCGCCTCG CTAAGGCGAT GGCCGACGTT GCGGAAAGGC TCGCCCGGAT CGGCATCACG
CCCTGGATAG AACCGCAGGC CGGCATGTTC CTCTGGTGCC GCCTGCCGGA TGGCATAGAC
GCCGCCAAAC TCGCAAGGGA ATCTCTCGGC AAAGGCATCG TGCTTGCACC AGGCAATGTC
TTCAGTCACG CACAAACGGC TGCCGGCTTT TTGCGCTTCA ACGTCGCCCA GTCGCAAGAC
GATCGGCTCT TCCGGGAGCT CGAAGCGCTG ATGGCCCTTG CATGA
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| Protein sequence | MEREPVQMQR NAASSLGESL IAKVMGTVQQ RIAARSLTPG SRLPSIRSFA LSMKVSKSTV
VEAYERLQAE GLIRSRPGSG FYVAAPLAPL TLAEIGPPVD RAVDPLWISR QALEPGEGVL
RPGCGWLSPS WMPEEGLRRA LRGIARGSSA TLVDYGAPLG LQPLRQLLAR RVAQHGIEAS
PDQILLTESG TQAIDLLCRF LLKPGDAVLV DDPCYFNFHA LLRAHQARIV GVPYTPSGPD
IGRFAEALTE HKPRLYITNS ALHNPTGATL SPLVGHRLLK LAEQSGLTII EDDIFADFEE
APAPRLAAFD GLERVVHIGS FSKTLSAAVR CGFIVAPRDW VEALTDLKIA TCFGAAGFSS
ELVMALLKDG SYRKHLEAVR QRLAKAMADV AERLARIGIT PWIEPQAGMF LWCRLPDGID
AAKLARESLG KGIVLAPGNV FSHAQTAAGF LRFNVAQSQD DRLFRELEAL MALA
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